Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3242 ATGGGCATAACTCAAGTGTGTGTCTGCCGCCACAAATATAGACAACCGATCATATGCCTCATTCTCTTTGCTATTGTTTTCACCGCCCAAGGAAGAGCAATTTCCAGTCTTATAGAAGTTGCCCagAAGGACATGAATGAGCGGGAATCAATCATGGTGGCAAAACCTCGGATAGGGTCTAGGCCTCCTAAGTGTGAAAAAAGATGCAGTACTTGTGGGCACTGTGAAGCAGTTCAAGTCCCGGTTGTACCTCAAATTCAAAGCCATAGAAGCCATTACTCATCAGCAAGAGCAACCAAAGCTGTTACTTACTCATCAAGAGGTGATGACCTTTCCAATTACAAACCAATGAGTTGGAAATGCAAGTGTGGGGACTACCTTTTCAATCCATGA 393 0.4402 MGITQVCVCRHKYRQPIICLILFAIVFTAQGRAISSLIEVAQKDMNERESIMVAKPRIGSRPPKCEKRCSTCGHCEAVQVPVVPQIQSHRSHYSSARATKAVTYSSRGDDLSNYKPMSWKCKCGDYLFNP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3242 130 Pfam Epidermal patterning factor proteins 57 130 - -
Ssu1g3242 130 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 1 130 IPR039455 GO:0010374
Ssu1g3242 130 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3242 Ssu-Chr1 84530633 84531204 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3242 - - gmx:100804735 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3242 1 84530633 84531204 Ssu1g3242 1 84530633 84531204 ECH