Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3237 ATGAGGTTGAGGGAGGACGTGCCTCGTAAAAACGATGACGGTGGTGAGAAACAGGAAGTGATAGAGGATAATGTAACTGTGGCCCAAAATCAATGGTGTCCCGTGGTGAATGCTGGGTTTTCTTCCCCCAAGAGAGTGGTTGTGGTTGGCTATGCTCTCACTACTAAAAAGATTAAGAGCTTTTTGCAGCCTAAGCTTGAAGGTTTAGCTAGGAACAAGGGAATACTATTCGTGGCTATTGACCATAATAGGCCTCTTTCAGATCAAGGTCCTTTTGATATTGTGTTACATAAGTTATCGGGGAAAGAGTGGCGTCAGGTCCTTGAGGATTATAGGCAGTCACATCCAGAAGTTACTGTTCTGGATCCTCCAGATGCCATACAACATTTACGCAATCGTCAGTATATGCTTCAGGCTGTTGCGGATATGAACCTTTCTGATTcttatgGCATAGTTGGTGTTCCTCGGCAATTAGTTATCAAGAGAGACGCATTAGCCATCCCAGAGTTGGTCAACAAAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTAGTTGCTGATGGAAGTGCAAAATCCCATGAATTATCCCTTGCTTATGAGAAATATTCCCTTCAAAAACTTGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCATGGAGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTCAGACGGTTTTCATTACCTGATGTTAGCAAGTGGGAACTCTCCAAAGATGCTGGGATATATCGTTTTCCAAGGGTTTCTTGTGCTGCAGCTTCTGCAGATGATGCGGATCTGGACCCTACTGTTGCTGGTAAGTTATCACTTATCATGTCTTCTTGA 867 0.4337 MRLREDVPRKNDDGGEKQEVIEDNVTVAQNQWCPVVNAGFSSPKRVVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVLEDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLSDSYGIVGVPRQLVIKRDALAIPELVNKAGLTLPLVAKPLVADGSAKSHELSLAYEKYSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSKDAGIYRFPRVSCAAASADDADLDPTVAGKLSLIMSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3237 288 Gene3D - 37 148 - -
Ssu1g3237 288 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 28 279 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Ssu1g3237 288 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 123 253 - -
Ssu1g3237 288 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 148 276 IPR040464 -
Ssu1g3237 288 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 28 279 - -
Ssu1g3237 288 PIRSF ITPK 16 285 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Ssu1g3237 288 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 48 127 IPR041429 -
Ssu1g3237 288 Gene3D - 159 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3237 Ssu-Chr1 84435337 84439561 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3237 K00913 - gmx:100127409 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3237 1 84435337 84439561 Ssu1g3237 1 84435337 84439561 ECH