Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3235 ATGAagGATTTAGCTACAACTGCTGTTATTTTGAAGTTTGAGCTTATATATGCTCCCACAATTGAGAATGGTGCTGACTTGGAAGCTTCTCTGGATGCTTCCTCTGCTGCTATCCATGAATTCCAAATTCCTCCTAAAGCTCTTATAGGATTGCATTCATATTGTCCTGTCCATTTTGATGCTTTACATGCAGTGCTTGTTGATGTAAGTGTACATGTCAGTCTACTGGAAGCTGCCTCTTACTCATCTGCATCAAAGTTGCCCAGCAATTCTGCCGACACTGAAGTCATTATTGATAGAAGTTACAACACATTGAATCAAGGCCTTGGTGGAGTTGCTTCTCTAGATATGAAAAATGTCATGCTTGTTAAAGGATTATTAACTGCTCGTGATATATTGCTTGAAGAACTACAAAAAATTAGCAAAGCAGTTAATGAAGCTTTAGACATTTCAGAGTTTGTGTCAATAATGAGTAATATGAAGTTATTAAATTCTGTGCTGCAAGCAAATCAATTTGCAATAGATGTTGAAGTTGTAGGAGAAGGCAAGCCACAAAATGGTCTTAAGCCTCTTCAGACTGCAGCTACACGTGTTGAACTTCATCGAAAGAGCATTGAACAAATGCGGATTAACAACAGCTCAATTCAAGACATGCAGATATTTGGAGATCCCTTGCATATGCCAATTGTGATTGTTGAACATGTGATAAATGTAGCCCGGCGTTGTCCAAGTGCCAATTCACTACTGAGACATATTGGGCATATAGATTCAGATAGCTTACCAATTGGCCTCAGCTCTGATTTTATAGGCAAGAAATTTGCACCACAAAGTAATGCTCGTGTGTTGGAGATTGTTGTCTTTGTGCATGGGTTTCAGGCATGTCTTGGGCATCATCTAGATTTACGACTTGTCCGGAATCAATGGCTTTTGATAGATCCCAAAGTAGAATTTCTGATGTCAGAGgctaataaagataaaacatttGGAGACTTCAGAGAGATGGGACATAGGCTAGCTAAGGaagttatttcttttcttaaaagcAAAATGGACAAAGCATCAAGATTTGGAAATTTGGGAGATATTAGGCTAAGTTTTGTTGGACATTCTATTGGTAACCTCATTATAAGAACAGCAATAGCAGATAGCATGATGGAGCCATTTCTAAGACACCTACATACATATGTTTCAGTATCTGGTCCACACTTAGGGTATCTTTATAGTTCAAACTCATTGTTTAATTCTCGATTGTGGTTTTTGAAGAAGCTAAAAGGCACACAGTGCATTCATCAACTCACTTTCACGGATGATCCAGATTTCCAAAATACATTTCTCTATAAACTGTGTAAGCAGAAGACCTTGGAACATTTTAGGAATATTATCCTGCTATCTTCCCCTCAGGATGGTTATGTGCCTTACCATTCTGCTAGAATTGAATCATGCCAGGCTGCTTCACGTGACACTTCAAAGAAAGGTAAACTATTCCTAGAGATGTTGAATGATTGTTTGGACCAAATCCGTGCCAACTCCACGGAACGTCGAGTCTTCATGCGCTGTGATGTCAACTTTGATGCATCTACCCAATGCAAGAATCTGGACTCTATAATCGGTCGGGCTGCGCATATTGAATTTCTGGATTCTGACATTTTCGCAAGGTTCATAATGTGGTCATTCCCAGATCTTTTTCGATAG 1692 0.3842 MKDLATTAVILKFELIYAPTIENGADLEASLDASSAAIHEFQIPPKALIGLHSYCPVHFDALHAVLVDVSVHVSLLEAASYSSASKLPSNSADTEVIIDRSYNTLNQGLGGVASLDMKNVMLVKGLLTARDILLEELQKISKAVNEALDISEFVSIMSNMKLLNSVLQANQFAIDVEVVGEGKPQNGLKPLQTAATRVELHRKSIEQMRINNSSIQDMQIFGDPLHMPIVIVEHVINVARRCPSANSLLRHIGHIDSDSLPIGLSSDFIGKKFAPQSNARVLEIVVFVHGFQACLGHHLDLRLVRNQWLLIDPKVEFLMSEANKDKTFGDFREMGHRLAKEVISFLKSKMDKASRFGNLGDIRLSFVGHSIGNLIIRTAIADSMMEPFLRHLHTYVSVSGPHLGYLYSSNSLFNSRLWFLKKLKGTQCIHQLTFTDDPDFQNTFLYKLCKQKTLEHFRNIILLSSPQDGYVPYHSARIESCQAASRDTSKKGKLFLEMLNDCLDQIRANSTERRVFMRCDVNFDASTQCKNLDSIIGRAAHIEFLDSDIFARFIMWSFPDLFR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3235 563 SUPERFAMILY alpha/beta-Hydrolases 284 479 IPR029058 -
Ssu1g3235 563 PANTHER UNCHARACTERIZED 191 563 IPR044294 -
Ssu1g3235 563 Pfam Protein FAM135 11 75 IPR022122 -
Ssu1g3235 563 Gene3D alpha/beta hydrolase 284 501 IPR029058 -
Ssu1g3235 563 Pfam Putative serine esterase (DUF676) 283 482 IPR007751 -
Ssu1g3235 563 PANTHER UNCHARACTERIZED 3 190 IPR044294 -
Ssu1g3235 563 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 191 563 - -
Ssu1g3235 563 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 3 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3235 Ssu-Chr1 84315173 84330004 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3235 - - gmx:100785285 691.804