Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3234 ATGGCCGAATTATCTCTTCCTCACGACTCCTACTTTCTCGGATTCGACAGTTCCACCCAGTCATTGAAGGCGACAGTGTTGGACTCAAACCTCAACATCGTGGCCTCGGAGCTTGTCCATTTCGATTCCGACTTGCCCCATTACAAAACCAAAGATGGGGTATACAGAGACCCCTCTGGCAGTGGCAGAATCGTTTCACCCACGTTGATGTGGGTGGAAGCCCTCGACCTAATGCTTCAAAAGCTTTCCAAATCAAATTTCGATTTTGCCAAGGTTGCTGCTGTTTCTGGCAGTGGCCAACAGCATGGTAGTGTGTATTGGAAGAGTGGCAGTTCTCAGATACTGTCATCATTGGATCCTAAGAGGCCATTGTTGGATCAGCTTGAAAATGCCTTATCTATTAGGGAATCCCCAATTTGGATGGATTGTAGCACCACTGCTGAGTGCAGGGCAATAGAGAAGGCTTGTGGGGGAGCCTTGGAGCTGGCTCGAGTCACGGGATCGCGTGCCTATGAGAGGTTTACTGGCCCCCAGATTAAGAAGATATTTGTTGCTCAGCCAGAAATTTATGACAGCACTGAGAGGATCTCGCTTGTTAGCTCATTCATGGCGTCTCTTTTCGTTGGTGCTTATGCTGCCATTGATCATTCTGATGGTGGAGGCATGAATTTAATGGACATAAGGGAAAAGGCTTGGTCTAAAGTAGCACTTGAGGCAACTGCCCCTGGTTTGGAGTCAAAACTTGGAGAGTTAGCCCCTGCATATGCCGTTGCTGGAAATATTGCTCCATATTTTGTAGAGAGGTATCACTTTAACAAGAATTGCTTGGTTGTTCAATGGTCAGGAGACAATCCTAATAGTGTGGCAGGTTTGACCCTAAATATTCCAGGAGATCTCGCCATCAGCCTTGGCACTAGTGATACTGTATTTATGATCACTAAAGAACCTAATCCAGGATTAGAGGGACATGTCTTCCCTAATCCAGTTGATGCAGAGGGCTACATGGTAATGCTGGTATACAAAAATGGGTCCCTTACCCGAGAAGATGTGCGCAACCGTTATGCAGAGAAATCTTGGgatgttttcaataaatttctgcAGCAAACACAACCTTTAAATGGTGGAAAGTTAGGTTTCTACTACAAGGAGCATGAAATTCTACCTCCTCTTCCAGTTGGTTTCCACCGCTATGTTATAGAAAATTTCTCACACACACTGGATGGAATGAAGGAACGGGAAGTGGAGGAGTTTGATCCTCCATCTGAGgTACGGGCATTAATTGAGGGTCAATTTCTCTCAATGCGGGCTCATGCTGAAAGATTTGGAATGCCTTCTCCTCCAAAGAGAATTATAGCCACTGGTGGAGCATCAGCAAATCATTGCATCCTTAGCTCAATAGCTTCAATTTTTGGCTGTGATGTCTATACAGTTCAAAGACCTGATTCAGCTTCACTTGGAGCTGCATTGAGAGCTGCTCATGGTTGGCTCTGCAACAAGAAGGGCGGGTTTTTACCCATATCTGATATGTACATGGACAAATTGGAGAAAACGTCTTTGAGCTGCAAACTTTCGGTGAATGCTGGAGATCAGGAGCTGGTTTCCAAGTATGCTTCCTTCATGAAAAAGAGAATTGAGATAGAGAATCGGCTCGTCCAAAAGCTTGGACGCTGTTGA 1674 0.4498 MAELSLPHDSYFLGFDSSTQSLKATVLDSNLNIVASELVHFDSDLPHYKTKDGVYRDPSGSGRIVSPTLMWVEALDLMLQKLSKSNFDFAKVAAVSGSGQQHGSVYWKSGSSQILSSLDPKRPLLDQLENALSIRESPIWMDCSTTAECRAIEKACGGALELARVTGSRAYERFTGPQIKKIFVAQPEIYDSTERISLVSSFMASLFVGAYAAIDHSDGGGMNLMDIREKAWSKVALEATAPGLESKLGELAPAYAVAGNIAPYFVERYHFNKNCLVVQWSGDNPNSVAGLTLNIPGDLAISLGTSDTVFMITKEPNPGLEGHVFPNPVDAEGYMVMLVYKNGSLTREDVRNRYAEKSWDVFNKFLQQTQPLNGGKLGFYYKEHEILPPLPVGFHRYVIENFSHTLDGMKEREVEEFDPPSEVRALIEGQFLSMRAHAERFGMPSPPKRIIATGGASANHCILSSIASIFGCDVYTVQRPDSASLGAALRAAHGWLCNKKGGFLPISDMYMDKLEKTSLSCKLSVNAGDQELVSKYASFMKKRIEIENRLVQKLGRC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3234 557 Pfam FGGY family of carbohydrate kinases, C-terminal domain 299 494 IPR018485 GO:0005975|GO:0016773
Ssu1g3234 557 Gene3D - 13 511 - -
Ssu1g3234 557 PANTHER XYLULOSE KINASE-LIKE ISOFORM X1 1 557 - -
Ssu1g3234 557 SUPERFAMILY Actin-like ATPase domain 296 495 IPR043129 -
Ssu1g3234 557 PANTHER SUGAR KINASE 1 557 - -
Ssu1g3234 557 CDD FGGY_D-XK_euk 11 493 IPR042024 GO:0004856|GO:0042732
Ssu1g3234 557 Pfam FGGY family of carbohydrate kinases, N-terminal domain 136 287 IPR018484 GO:0005975|GO:0016773
Ssu1g3234 557 Gene3D - 292 477 - -
Ssu1g3234 557 PIRSF GlpK 9 118 IPR000577 GO:0005975|GO:0016301
Ssu1g3234 557 PIRSF GlpK 124 502 IPR000577 GO:0005975|GO:0016301
Ssu1g3234 557 SUPERFAMILY Actin-like ATPase domain 11 290 IPR043129 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3234 K00854 - gmx:100778495 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3234 1 84290367 84294146 Ssu1g3234 1 84290367 84294146 ECH