Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3221 atggaagGTTGGGACCCGAATACGAAGTCGACGCTGACACAGATCCCGTTGCTAACGACAAAGGCGGGTCCTCGAGACGGCGCGGCATGGACGCAGAGGCTGAAGGAGGAGTACAAGGCTCTCATTGCCTACACCCAGATGAACAAGTCCAACGACAACGATTGGTTCCGTATCTCCGCCGCCAATCCCGAAGGCACTCGTTGGACCGGTAAATGCTGGTACGTCTACAACCTCCTCAAGTACGAATTCGACCTCCAATTCGACATCCCCGTCACTTACCCTTCCACCGCACCCGAACTCGAACTCCCTCAATTGGATGGAAAGACCCAGAAggttatttttctcttcttcttctccttaaTTTTATGTCTTCAACAACGTTTGATTTGgtcccttcttttcttttcttttttgcagaTGTATAGGGGTGGAAAGATCTGCTTGACTGTGCACTTCAAGCCTCTCTGGGCCAAAAATTGCCCCAGATTTGGTATAGCACATGCACTTTGCTTAGGCCTTGCCCCATGGCTTGCAGCAGAGGTTCCCATTCTTGTCGATTCTGGTATGATCAAGCACAAAGATGATGCAACTACATCAACTGAATCTTAG 609 0.4548 MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKVIFLFFFSLILCLQQRLIWSLLFFSFLQMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSTES 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3221 202 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 139 201 - -
Ssu1g3221 202 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 8 112 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 139 191 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 112 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 139 201 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 112 - -
Ssu1g3221 202 Gene3D Ubiquitin Conjugating Enzyme 1 198 IPR016135 -
Ssu1g3221 202 PIRSF Ufc1 135 196 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 PIRSF Ufc1 3 130 IPR014806 GO:0061657|GO:0071569
Ssu1g3221 202 SUPERFAMILY UBC-like 5 192 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3221 K12165 - twl:120011102 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3221 1 83968032 83969494 Ssu1g3221 1 83968032 83969494 ECH