Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3217 ATGGAAGCACAGGCAATCATTGCTGAAGAATCTAAGCAATTTGAAGCTTGGAGGGACTCACTGGAAACTGTTCCTACTATTAAGAAATTGAGGGCTTATGCCGAAAGAATCAGGCTTGCTGAGCTTGAGAAATGCTTAGGTAAGATGGGTGATGATATACCAAAGAAAACACGGAGAGCTGTGGATGATCTTAGTCGGGGTATAGTGAATAAGTTGCTTCATGGTCCAATGCAACATTTAAGGTGTGACGGGAGTGACAGCCGGACTCTTAGTGAGGCACTGGAGAACATGCATGCTTTGAATAGGATGTTCAACCTTGAGACTGAAATATCAGTTTTGGAGCAGAAGATTCGAGCAAAGGTGGAACAAAACCAGAAATGA 381 0.4304 MEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSEALENMHALNRMFNLETEISVLEQKIRAKVEQNQK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3217 126 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 126 - -
Ssu1g3217 126 PANTHER GLUTAMYL-TRNA REDUCTASE 1 126 - -
Ssu1g3217 126 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 2 106 IPR015896 GO:0008883|GO:0033014|GO:0050661
Ssu1g3217 126 Coils Coil 103 123 - -
Ssu1g3217 126 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 2 105 IPR036453 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3217 Ssu-Chr1 83880190 83880570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3217 K02492 - gmx:100810957 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3217 1 83880190 83880570 Ssu1g3217 1 83880190 83880570 ECH