Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3213 ATGGAGATTGAGGAGACGTCAAGTGGAGTGTCTATTGGGTTTCCTCTGGGTCTAGCTCTTCTCGTTGCCTTGTTATTGTTCATTTGTTGCTTCTTTTGCTGCTGCTTGCACTGGGAAAGGCTCCAAGCTATGTTTCCATTTTGTGGGGTTATCAACACTCAGCCTCAGATACAACTACAAGCAGACTTAACTCCCCCTCCTCAGAAACCGGGGTTTCCTGTTTTGATGATGAAGCATAACCGAGGTCAGAGCTTGCCAGTGCTGATGCCAGGAGATGAGGTTCCAAAATTCATAGCCTTAGCATGCCCATCTCAACCTTCAACGGACGAAAAGATCTCAATCCATGTGCAGAAGGAAGCTCCAAATGATTTTTGTGGCGGCGCTTAA 387 0.4677 MEIEETSSGVSIGFPLGLALLVALLLFICCFFCCCLHWERLQAMFPFCGVINTQPQIQLQADLTPPPQKPGFPVLMMKHNRGQSLPVLMPGDEVPKFIALACPSQPSTDEKISIHVQKEAPNDFCGGA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3213 128 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 126 IPR037699 -
Ssu1g3213 128 PANTHER PROTEIN, PUTATIVE-RELATED 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3213 Ssu-Chr1 83777952 83778475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3213 - - gmx:100527674 200.675