Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3211 ATGCTCATTACTCATGACCCTATTTTATTGAATTCCACTTTTGTCCCCACTCCCATTTCAAAGCATCGCTGTGCATCTCAACGTTCTCctccttttctttgtttctcttctcCCTCAGATATGGATACCAAAGCTGCAGGTCAAAGTCTTTACCCATTGCACCATTGTAAAACTCTTCACCTGGTTAGACATGCCCAAGGATTTCACAATGTAGAAGGTGAGAAGAACTATGAAGCGTACATGTCTtatgatctttttgatgcaAACCTAACCCCTCTTGGCTGGAAACAGGTTGATAATCTGAGAGAACATGTTAAGACAAGCGGTCTTTCCAAACGAATTGAACTAGTTATTGCTTCCCCCTTGTTAAGGACCATGCAAACAGCAGTTGGAGTCTTTGGTGGTGAAGCATATACTGATGGGATTAATGTACCTCGCCTGATGAATGACAATGTGGGAGATAGTGGTCGCCCTGCAATTTCTAGTCTGAATGCCCCACCATTTATAGCAGTAGAGCTTTGCCGAGAACATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACTGAGTACCGACATATGTTTCCAGCAATTGATTTTTCATTGATAGAAAATGATGACGACATTTTATGGAAACCTGACATCAGAGAGAAGAATGAAGAAGTTGGTGCAAGGGGACTGAAATTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATAGCGGTTGTTACCCACAGCGGTTTTCTGTTTCATACCCTAAGTGCTTTTGGAAATGATTGCCATCCAACTGTGAAGAGCGAAATCTGTACACACTTTGCTAATTGTGAGCTACGTTCAATGGTTATCATCGATAGAGGGTGA 867 0.4037 MLITHDPILLNSTFVPTPISKHRCASQRSPPFLCFSSPSDMDTKAAGQSLYPLHHCKTLHLVRHAQGFHNVEGEKNYEAYMSYDLFDANLTPLGWKQVDNLREHVKTSGLSKRIELVIASPLLRTMQTAVGVFGGEAYTDGINVPRLMNDNVGDSGRPAISSLNAPPFIAVELCREHLGVHPCDKRRSITEYRHMFPAIDFSLIENDDDILWKPDIREKNEEVGARGLKFLEWLWTRKEKEIAVVTHSGFLFHTLSAFGNDCHPTVKSEICTHFANCELRSMVIIDRG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3211 288 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 36 288 - -
Ssu1g3211 288 CDD HP_PGM_like 58 129 IPR013078 -
Ssu1g3211 288 Pfam Histidine phosphatase superfamily (branch 1) 59 132 IPR013078 -
Ssu1g3211 288 SMART PGAM_5 58 254 IPR013078 -
Ssu1g3211 288 Gene3D - 56 288 IPR029033 -
Ssu1g3211 288 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 288 - -
Ssu1g3211 288 SUPERFAMILY Phosphoglycerate mutase-like 57 286 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3211 Ssu-Chr1 83693094 83700383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3211 - - cam:101489637 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3211 1 83693094 83700383 Ssu1g3211 1 83693094 83700383 ECH