Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3205 ATGGAAACTGTTCCCGATCAAGCCACGAGTTTATGCAGTCACTGTGATCGGGCTATCCCTTCAGCAAACATTGATTTGCATTATGCTCATTGCTCACGGAACCTTGAAAAGTGCAAAGTTTGTGGTGACATGGTTCCAAAATTATATGCCGACGAGCATTATTTAAACACTCATGCTCCGGTTGCCTGTTCTTTGTGCAGCGAGACTATGGAACGTGATATCGTAGATATCCATCAAGGTGAAAATTGCCCCAGAAGGATTGTCACCTGTGAGTTCTGTGAATTTCCTTTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACATTTGTAACAAATATGTTAGACTGCGTGAAAGATACAACCACGAAGATAGTTGCAATAGAATCCAAGATAATTCTGTAGGGTCTTCAAGGAACGTGAGGCCAGCTGAAAGAGATGAGGGTGCTCGAAGAAGGCCGCAGAATGATTTCTCAAGAAGACGTCTTCTTTTCACCATAGCAATCACTGTAATACCTTTAAACTGGGcctggaagaagaaaaaaacaagaggGCATAAACGCAGAAACGCCATGTCAACCACAAATTTTGCACTTTTCAAGGTTCTGTCGACGCTGCTACGAGCAAATGCAACAATGGGGATGGTCCGATAG 678 0.4204 METVPDQATSLCSHCDRAIPSANIDLHYAHCSRNLEKCKVCGDMVPKLYADEHYLNTHAPVACSLCSETMERDIVDIHQGENCPRRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHICNKYVRLRERYNHEDSCNRIQDNSVGSSRNVRPAERDEGARRRPQNDFSRRRLLFTIAITVIPLNWAWKKKKTRGHKRRNAMSTTNFALFKVLSTLLRANATMGMVR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3205 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 58 IPR013083 -
Ssu1g3205 225 MobiDBLite consensus disorder prediction 140 162 - -
Ssu1g3205 225 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 5 180 - -
Ssu1g3205 225 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 5 180 - -
Ssu1g3205 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 111 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3205 Ssu-Chr1 83604408 83610300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3205 - - gmx:100306673 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3205 1 83604408 83610300 Ssu1g3205 1 83604408 83610300 ECH