Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3199 ATGAAGGCTTGTGGGAGTAAGAGTGTGAAAAGTGAGAGCAGTGAAGGAGGTACCAATGATTCAGTGGCTTTGGGAGATGTGATATTTATCAAGCTTCGTGGTGGTTCATGGTGGCCTGCACAGGTTGTTGATGAAAATAGTGTTAATAAGAGCGTTAAACCGAGCAAACCAAGCAAACGATTGCTGGGGGAAGTACTTGTTAGGCATTATGGAAGCTATACATACTCGTTTGCAGATCCTATTAAATGTCGTTCTGAGTTTAAGACGATACTTGAGCGTAATGATGGTTCTCTCAGGAAAATACTTCTGCAAACTCTTGAACAGGATCTTCCTAGCACAAAATCCCGTAGATCAAAGGGGTCATCATTGAAGCCTAAAGGAACATCAAGCAAAAATGCTGAAGGCAAGAGAAAATCCAATGGGCAAGATAAGGGGCAGAACAAAATCAAGCGCCAAAAGCAAAAAGAGACGTTGAATGACGATGCTAGTCAAAGTCGTGAAACAAGCTCGTTAGGAAAGTCCCCCGAGTTGAGTTCCAGGAGGATAAGAGTGATGGAAAACCTTGGCCTCATTGCTCCTGCTGGGTCACCGTTCCAAAAAGatgcacataaatataataaagccTCGTGA 630 0.4206 MKACGSKSVKSESSEGGTNDSVALGDVIFIKLRGGSWWPAQVVDENSVNKSVKPSKPSKRLLGEVLVRHYGSYTYSFADPIKCRSEFKTILERNDGSLRKILLQTLEQDLPSTKSRRSKGSSLKPKGTSSKNAEGKRKSNGQDKGQNKIKRQKQKETLNDDASQSRETSSLGKSPELSSRRIRVMENLGLIAPAGSPFQKDAHKYNKAS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3199 209 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g3199 209 MobiDBLite consensus disorder prediction 109 180 - -
Ssu1g3199 209 MobiDBLite consensus disorder prediction 190 209 - -
Ssu1g3199 209 PANTHER ALDOLASE-RELATED 10 142 - -
Ssu1g3199 209 MobiDBLite consensus disorder prediction 130 162 - -
Ssu1g3199 209 Pfam PWWP domain 25 79 IPR000313 -
Ssu1g3199 209 PANTHER ALDOLASE-RELATED 127 205 - -
Ssu1g3199 209 PANTHER OS08G0477800 PROTEIN 10 142 - -
Ssu1g3199 209 PANTHER OS08G0477800 PROTEIN 127 205 - -
Ssu1g3199 209 MobiDBLite consensus disorder prediction 109 129 - -
Ssu1g3199 209 ProSiteProfiles PWWP domain profile. 24 89 IPR000313 -
Ssu1g3199 209 Gene3D - 15 121 - -
Ssu1g3199 209 SUPERFAMILY Tudor/PWWP/MBT 22 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3199 - - gmx:100815242 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3199 1 83499906 83515835 Ssu1g3199 1 83499906 83515835 ECH