Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3190 ATGGCAACGATCTCAGGCAGTTGCTCCTCTTCCCCGAAtctcaaaaaattcccaaaccAATCCCCACCGTTGACCGACCCTCTCCGCAAGGACCACGTGTCCTTCCCCGCTTGTCGCTTCGATCGGAGCCCGAGCCTCGTGGCGGCTCGCGCGGTGGCTCGGGATGTTTCCGACGGAGCGGCGGTGGCGGTGAAGGGGTTGGAGAAAGATCAGCGCACGCTGTGGCGGAGATACGTGGATTGGCTGTACCAGCACAAAGAACTGGGACTCTACTTAGACGTGAGTCGGGTCGGGTTCACGGAGGAGTTCGTGAGGGAAATGGAGCCCCGTTTTGAAGCGGCGTTTCGGGCGATGGAGGATTTGGAGAAGGGTGCGATCGCGAATCCCGATGAGCGTCGCATGGTGGGACACTATTGGTTGAGGGACCATGAGCGCGCACCCAACGGATTCCTCAGGAGGCAGATTGAGAACACTCTCGACGCTGTTTCCAGGTTCGCTAACGACGTCGTCAGTGGTAGGATTAAGCCTCCTTCGTCTCCGGAGGGTCGCTTTACGCAAATACTGTCTGTGGGAATTGGAGGTTCTGCTCTTGGACCACAGTTTGTTGCAGAGGCATTGGCTCCTGATAATCCTCCACTCAAGATAAGATTTGTTGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGGCCCGAGCTAGCTTCAACACTTGTGATTGTGATTTCAAAGAGTGGAGGTACCCCAGAGACTAGAAATGGTTTATTGGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGGATTTTCCGAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAAAACTGCCACAATTGAGCGCTGGTTAGCTAGATTTCCTATGTTTGATTGGGTGGGAGGTAGAACGTCGGAGATGTCTGCAGTTGGCCTTCTTCCAGCAGCCCTTCAGGGCATTGATATTAGAGAAATGCTTGCTGGTGCAGCATTGATGGATGAGGCAAATAGAAGTACTGTGTTAAGGAATAACCCTGCTGCTCTGCTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATTCTTCCATACAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAGCTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATCAGTGTCTATGGAAATAAAGGAAGCACAGATCAACATGCCTATATTCAACAATTGAGGGAAGGTGTACACAATTTCTTTGTGACATTCATTGAGGTGCTACGTGATAGACCCCCTGGTCATGATTGGGAACTTGAACCTGGTGTCACATGTGGCGATTACTTGTTCGGTATGCTACAGGGAACAAGGTCAGCTCTGTATGCTAATAACCGAGAGTCCATCACAGTCACTGTACAAGAAGTGACACCAAGAACAGTTGGTGCTCTTATTGCACTTTACGAACGAGCAGTAGGAATTTATGCCTCCCTTGTCAACATAAATGCTTATCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCGGGTGAAATACTAGCACTTCAGAAGCGAGTATTGGCAGTGTTAAATAAGGCAAgcTGCAAAGAGCCTGTTGAGCCATTGACACTTGAAGAAGTAGCTGATCGTTGCCATGCTTCTGAAGATATTGAAATGATTTACAAGATTATTGCACACATGGCCGCCAATGACAGAGCACTAATTGCGGAAGGCAGTTGTGGTTCACCACGGAGCATCAAGGTTTTTCTTGGGGAATGTAACATTGATGAATCATATGCTTGA 1842 0.4794 MATISGSCSSSPNLKKFPNQSPPLTDPLRKDHVSFPACRFDRSPSLVAARAVARDVSDGAAVAVKGLEKDQRTLWRRYVDWLYQHKELGLYLDVSRVGFTEEFVREMEPRFEAAFRAMEDLEKGAIANPDERRMVGHYWLRDHERAPNGFLRRQIENTLDAVSRFANDVVSGRIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDKTATIERWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGAALMDEANRSTVLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRTVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEILALQKRVLAVLNKASCKEPVEPLTLEEVADRCHASEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVFLGECNIDESYA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3190 613 Gene3D - 323 518 - -
Ssu1g3190 613 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g3190 613 CDD SIS_PGI_2 368 532 IPR035482 -
Ssu1g3190 613 Gene3D - 137 322 - -
Ssu1g3190 613 MobiDBLite consensus disorder prediction 1 28 - -
Ssu1g3190 613 Hamap Glucose-6-phosphate isomerase [pgi]. 87 536 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 613 - -
Ssu1g3190 613 CDD SIS_PGI_1 156 322 IPR035476 -
Ssu1g3190 613 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 613 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 187 206 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 509 522 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 299 317 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 375 396 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 477 495 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 PRINTS Glucose-6-phosphate isomerase signature 495 509 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 26 542 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 Pfam Phosphoglucose isomerase 118 443 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 Pfam Phosphoglucose isomerase 474 534 IPR001672 GO:0004347|GO:0006094|GO:0006096
Ssu1g3190 613 SUPERFAMILY SIS domain 70 536 IPR046348 GO:0097367|GO:1901135
Ssu1g3190 613 ProSitePatterns Phosphoglucose isomerase signature 2. 509 526 IPR018189 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3190 Ssu-Chr1 83252472 83258182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3190 K01810 - gmx:100791285 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3190 1 83252472 83258182 Ssu1g3190 1 83252472 83258182 ECH