Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3187 ATGGCTTCCACACTCTGCTCCTCTACTTGCAGACCATCCGCCCTTTTCTCCTCCTCCACGCTACGACGTCGTCTGCCCCTCGTCGGGGCGTTTTGCATGCTCAGTTTGGGACTCTCCAATCTCTACACACCCTTGTACTCCTCTGCCCTCAAAACGGGGTGCGTTCAATCTCTCTTACGATCCAAGTTGGGTATCCGCGGCCAGTCCAGCATCAGAATGGAAGGGAGTAACATCACTGTCCCAAGCATTGTTGTCTATGTCACTGTTCCCAACAAAGAAGCAGGGAAGAAGTTGGCTGAAAGCATCGTCAAAGAGAAGCTTGCAGCTTGTGTGAACAGGGTACCGGGTATCGAATCAGTGTACCAGTGGGAGGGAAAGATCCAAACTGATTCTGAGGAACTTCTTATAATCAAGACTAGGCAATCCCTTCTGGAGGCACTGACAGAGCATGTCAAAGCAAATCATGAATATGATGTGCCAGAGGTGATCTCCTTACCCATCACTGGGGGCAATCTTAAATACTTGGAATGGATTAAAGAGAGCACAAGGGAGTGA 555 0.4955 MASTLCSSTCRPSALFSSSTLRRRLPLVGAFCMLSLGLSNLYTPLYSSALKTGCVQSLLRSKLGIRGQSSIRMEGSNITVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWEGKIQTDSEELLIIKTRQSLLEALTEHVKANHEYDVPEVISLPITGGNLKYLEWIKESTRE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3187 184 PANTHER PROTEIN CUTA CHLOROPLASTIC 7 183 - -
Ssu1g3187 184 Gene3D - 64 183 IPR015867 -
Ssu1g3187 184 Pfam CutA1 divalent ion tolerance protein 83 180 IPR004323 GO:0010038
Ssu1g3187 184 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 7 183 IPR004323 GO:0010038
Ssu1g3187 184 SUPERFAMILY GlnB-like 82 183 IPR011322 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3187 K03926 - gmx:100792337 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3187 1 83178844 83181970 Ssu1g3187 1 83178844 83181970 ECH