Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3180 ATGAGTGGTGACGCCCAAACCCAAATCCAAACCCAAGCCCCGGACACCAAAGCAGACGAAACCCACACCCAAACCACCAACACCAAACAGGAAGAATCTCAGGCTCAGGCTCAGGCTCACTCCCCCGATTATGCTCCATACCCTAAACTGGACCCCAACGATGTTGCGCCACctcctcaacaacaacaacctgtCAACGCTAACCTCGAATCTCGCGCCCCCATTTCCGGCGATGCTGCCACTACCATGCCCAAAGACTCCAATCCCTATGTCACTCCTGCGCCAGTTCCCGCTTCTTCTTCTAAGACTACTTTAGATTCGGTGAAAGACGTTCTCGGCAAATGGGGAAAGAAAGCCGCCGAGGCCACCAAGAAGGCCGAGGATCTCGCCGGCAACATGTGGCAGCACTTGAAAACGGGTCCGAGTTTTGCGGATGCCGCCGTGGGGAGGATTGCTCAGGGAACGAAAGTTCTTGCAGAAGGAGGATATGAGAAGATCTTTAGGCAAACATTTGAGACAGTTCCAGAGGAGCAGCTTCTGAAAACGTATGCATGCTATCTGTCCACCTCGGCTGGACCTGTGATGGGAGTCTTGTATTTGTCAACGGCAAAGCTGGCGTTTTGTAGTGATAACCCACTTTCTTACCAAGTGGCTGACCAGACTCAATGGAGCTATTACAAGGTGGTCATTCCATTGCACCAGCTGAGAGCTGTAAACGCATCAACAAGCAGAACCAACTCATCTGAAAAATATATACAGATTATCTCTGTTGACAACCATGAATTTTGGTTTATGGGCTTTGTGCACTATGACAGCGCTgttaaaaatattcaaggagCAGTGCAGCCTCGCTGA 855 0.4854 MSGDAQTQIQTQAPDTKADETHTQTTNTKQEESQAQAQAHSPDYAPYPKLDPNDVAPPPQQQQPVNANLESRAPISGDAATTMPKDSNPYVTPAPVPASSSKTTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQVADQTQWSYYKVVIPLHQLRAVNASTSRTNSSEKYIQIISVDNHEFWFMGFVHYDSAVKNIQGAVQPR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3180 284 MobiDBLite consensus disorder prediction 1 40 - -
Ssu1g3180 284 MobiDBLite consensus disorder prediction 1 104 - -
Ssu1g3180 284 SMART gram2001c 165 242 IPR004182 -
Ssu1g3180 284 MobiDBLite consensus disorder prediction 81 104 - -
Ssu1g3180 284 PANTHER GEM-LIKE PROTEIN 2 30 283 IPR037848 -
Ssu1g3180 284 PANTHER GEM-LIKE PROTEIN 1 30 283 - -
Ssu1g3180 284 Gene3D - 163 282 IPR011993 -
Ssu1g3180 284 CDD PH-GRAM_GEM 176 282 - -
Ssu1g3180 284 Pfam GRAM domain 166 281 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3180 Ssu-Chr1 83000137 83002884 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3180 - - gmx:100794961 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3180 1 83000137 83002884 Ssu1g3180 1 83000137 83002884 ECH