Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3112 ATGGAAGAAACATGCGAATTTCGGAGTTGGGATGAATTGATTCCTGATGCCCTAGGGGTGATCTTCACCAATCTTTCTCTTCAGGAAAGAGTGACAGTGATCCCCAGGGTATGCAAATCCTGGGCTAATGCAGTAACTGGACCTTACTGCTGGCAAGAGATAGACATTAAGGATTGGAGCAACCGGTGCCAGCCTGACCAACTCGATAAGCTGGTTGAGATGCTCATCACAAGAAGTTGTGGATCCCTCCGCAAACTCAGTGTTTCTGGTCTCCAAACTGAGAGGATCTTCACTTTCATTGCTGACAATGCCTGTTCCCTCCAGACTTTGCGACTGCCAAGGAGCAGTATGAGTGATTCGATTGTGGAACAGATTGCTGGGAGACTTTCTATGATTTCTTTCTTGGATGTGAGCTACTGTATTAAAATTGGTCCCTATGCGCTTGAGATGATTGGCAAGAACTGCAAGATACTAGAAAGGTTGTGTCGGAACATGCATCCATTGGATACTGCGGGCAAGCCCTTTCAAGATGATGAAGCATATGCAATTGCCTCCACAATGCCTAAGCTCAAGCATCTTGAAATTGCTTATCATCTTGTGAGCACTTTGGGTGTCCTTCAAATACTTGCAAACTGTCCTAACCTTGAATTTTTGGATCAAAGGGGTTGTTGGGGTGTTGGACTTGACAACATGTTTGTAAAGCAGAAATTTCCAAAACTGACGGTTTTGGGGCCTTTTGTTAATGACACTTACGAGAGTGATGGCTGGGATGATTTCTCAGATGTGTCAGATTCTTCTGAGTACTTGCCATGGGACTTTCTGGCTGGTGGCATGGGTGAATACTATGTTGATGATAGTGACAGTTATGATGGAATGTGGGATGATGAAGGCAGGCTAGATGAGCTTCAGTTCGGGTTTTATGAAGGGATAGAAGATGCAGGAATGTATTGGCCTCCATCTCCATAA 966 0.4472 MEETCEFRSWDELIPDALGVIFTNLSLQERVTVIPRVCKSWANAVTGPYCWQEIDIKDWSNRCQPDQLDKLVEMLITRSCGSLRKLSVSGLQTERIFTFIADNACSLQTLRLPRSSMSDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKILERLCRNMHPLDTAGKPFQDDEAYAIASTMPKLKHLEIAYHLVSTLGVLQILANCPNLEFLDQRGCWGVGLDNMFVKQKFPKLTVLGPFVNDTYESDGWDDFSDVSDSSEYLPWDFLAGGMGEYYVDDSDSYDGMWDDEGRLDELQFGFYEGIEDAGMYWPPSP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3112 321 Gene3D - 9 50 - -
Ssu1g3112 321 Gene3D Ribonuclease Inhibitor 51 261 IPR032675 -
Ssu1g3112 321 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 321 - -
Ssu1g3112 321 SUPERFAMILY RNI-like 36 242 - -
Ssu1g3112 321 PANTHER F-BOX PROTEIN FBW2 6 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3112 Ssu-Chr1 81518907 81520163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3112 - - gmx:100810036 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3112 1 81518907 81520163 Ssu1g3112 1 81518907 81520163 ECH