Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3109 ATGGCCACTCTTGTTCAATGCTTTCTCAAACTCTTCCTCCTTATCTCTGTCTTTCAGCTCTCCTTCGCTACTAGGAGGCTGAGCGAGCTGGTTCAGGACCAGACTCAGCTTCTCCATTACCACAACGGTCCTTTGCTATACGGCAAAATCGCCGTGAACCTCATTTGGTACGGTCAGTTCAAACCATCCCAAAAGGCCATAATCACCGATTTCGTTGCCTCACTCTCATCCCCAGCTTCTCAAAGCAACCAACCCTCGGTTGCCATGTGGTGGAAAACCACGGAGAAGTACTACCACCTGAGTCCCAAGAAGGCTGCCCCTCTTTCCCTTTCACTGGGCGATCAGATTCTCGACGAGAGTTATTCGCTGGGAAAGTCACTAACCAGCAAGCACCTTGTCCAGCTGGCTTCCAAAGGGGGACAGAGAAACGCCGTCAACGTTGTTCTGACATCCGCTGACGTGGCGGTCGAAGGTTTCTGTATGAGCCGATGTGGGACTCACGGATCCTCCTCTTCGGTGGGTCACGTGAAGGGCGGCAAGAACTACAAGTTTGCATACATCTGGGTTGGTAACTCCGAGACCCAGTGCCCGGGCCAATGCGCCTGGCCATTCCACCAGCCAATTTATGGGCCTCAGAACCCACCGTTGATTGCTCCCAACAACGATGTGGGACTTGACGGAATGGTTATCAACCTGGCTAGCCTCTTGGCCGGAACCGCCACCAACCCCTTCGGAAATGGCTACTTCCAGGGTCCCGCCGAGGCTCCACTCGAAGCTGCATCGGCGTGTCCTGGGGTTTATGGTAAAGGGGCTTATCCTGGTTATGCTGGTAACTTGTTGGTTGACTCTACCACTGGTGCTAGCTACAATGTGAATGGTGCTAACGGGAGGAAGTATCTTGTTCCTGCTTTGTATGATCCTTCTACATCGTCTTGCTCAACGCCCGTGTGA 951 0.531 MATLVQCFLKLFLLISVFQLSFATRRLSELVQDQTQLLHYHNGPLLYGKIAVNLIWYGQFKPSQKAIITDFVASLSSPASQSNQPSVAMWWKTTEKYYHLSPKKAAPLSLSLGDQILDESYSLGKSLTSKHLVQLASKGGQRNAVNVVLTSADVAVEGFCMSRCGTHGSSSSVGHVKGGKNYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQNPPLIAPNNDVGLDGMVINLASLLAGTATNPFGNGYFQGPAEAPLEAASACPGVYGKGAYPGYAGNLLVDSTTGASYNVNGANGRKYLVPALYDPSTSSCSTPV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3109 316 PANTHER PROTEIN EXORDIUM-RELATED 1 316 - -
Ssu1g3109 316 PANTHER PROTEIN EXORDIUM-LIKE 5 1 316 IPR006766 -
Ssu1g3109 316 Pfam Phosphate-induced protein 1 conserved region 38 315 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3109 Ssu-Chr1 81476919 81477869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3109 - - gmx:100794117 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3109 1 81476919 81477869 Ssu1g3109 1 81476919 81477869 ECH