Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3103 ATGAGGATGAGGGTTTGGGGATCGGAGATCGTGTTCGCCATGTTGCTCTGTGGGACCCTCTCATGCACCGCTCAACCGCAGCATAGGGTTTCTCTCTCCTCCACCGTCTGTCCCGTTCACTCCGCTCTCGATTTCATCTTAGGGTTTCCAGATTGGACCTGCCCCCTTCCCGATTCCCTTGGATCTATTGCCGTCACCGAGGGAGATGAGGTTTCTTTGCAGAAGGCACTGAATATGGTTCACAAGAATAACCATGAGTATGTGGCTGTGCTGTTCTATGCGTCGTGGTGCCCTTTCTCGCTGGTGTTTAGACCGGTTTTCTCGGTCCTCTCTGCGCTGCACTCTTCAATTCCTCATTTTGCTATTGAAGAATCATCGGTTAGGCCGAGCATACTGTCCAAATATGGTGTCCATGGCTTCCCTACactgttcattttgaattctacCATGCGGGTTCGTTATCATGGGTCTCGGACACTTGGCTCACTCATTGGTTTCTACAATGACGTTACTGGGATTAGGATTGATTCACTTGATCAACTATCACTTGAGAAAATTGGTCGTTTATCCGCTGATGAGAATCATGGTAATACCAAGCCAGAAAGTTGTCCATTTTCATGGGCTAGATCTCCTGAAAATTTACTGCGTCAGGAAACTTATTTGGCTCTGGCCACTACATTTGTGGTTTTGAGATTACTATACTTATTTTTTCCTACGCTGCTTATATGTATTCAATATGCTTGGAGAAGGGTCATCCAAAATGTTAGAATATGGAGCTTGCTGGAACATCCTTTGGTTTATTTGAAGCGGCTAATACAGTCATTTAACTGTTTGAAAGAGCCATGCAAGAGAAGTAATCTGCAGGAAGGAGCAATGAATGCTAGAGCATGGGCTTCAAAGTCCCTTGCCACCGTTTCAATTGGAGAGGAAAGCACCAGCCGCGGGATGCACCAGTGA 957 0.4556 MRMRVWGSEIVFAMLLCGTLSCTAQPQHRVSLSSTVCPVHSALDFILGFPDWTCPLPDSLGSIAVTEGDEVSLQKALNMVHKNNHEYVAVLFYASWCPFSLVFRPVFSVLSALHSSIPHFAIEESSVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLGSLIGFYNDVTGIRIDSLDQLSLEKIGRLSADENHGNTKPESCPFSWARSPENLLRQETYLALATTFVVLRLLYLFFPTLLICIQYAWRRVIQNVRIWSLLEHPLVYLKRLIQSFNCLKEPCKRSNLQEGAMNARAWASKSLATVSIGEESTSRGMHQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3103 318 CDD PDI_a_ERp44_like 68 167 - -
Ssu1g3103 318 Gene3D Glutaredoxin 64 176 - -
Ssu1g3103 318 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 317 IPR044606 -
Ssu1g3103 318 SUPERFAMILY Thioredoxin-like 83 172 IPR036249 -
Ssu1g3103 318 ProSiteProfiles Thioredoxin domain profile. 43 191 IPR013766 -
Ssu1g3103 318 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Ssu1g3103 318 Pfam Thioredoxin 82 165 IPR013766 -
Ssu1g3103 318 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3103 Ssu-Chr1 81297581 81300410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3103 - - gmx:100815032 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3103 1 81297581 81300410 Ssu1g3103 1 81297581 81300410 ECH