Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3093 ATGGAGAGGAGCACTCCCGTGAGGAAGCCACACGCTTCAACCGCAGATCTGCTCACTTGGTCTGAAACTCCACCGGCTGATTCCCCGGCTCCTCCTTCCTCCGCCGTTCGTTCTCACCAGCCGTCGGATGGGATCAGGAAGGTGGTATTTGGGGGTCAGGTCACCGATGAAGAGGTGGAGAGCTTAAACAAACGAAAGCCTTGTTCGGAGTATAAGATGAAGGAGATAACTGGTAGTGGAATATTTGTTGCCAATGGCGAAGATGATGCCTCAGAAGCTGGTAGTGCCAACCCAAGTAAGACTGGAGTACGTATGTACCagCAAGCGATTGCTGGAATCAGCCATATCTCCTTTGGCGAGGAGGGGAGTATTTCTCCAAAAAAGCCCACTACTTTGCCTGAGGTGGCCAAGCAGCGTGAGCTAAGTGGAACTTTGGAAAGTGAAGACTCTATATTGCAAAAGCAACTTTCTGATGCGAAGTGCAAGGAGCTTAGCGGTCATGACATATTTGCTCCACCACCAGAAATCAAACCCAGGCCAATAACTCCTCGCATACTGGAGTTAAAAGGGAGCATAGACATTGGAGAACGTCATGCTGACGGAGATCAAGGCGATACCGACTCTGCTGGGGAACCAATGAAGACAGCAAAGAAGATTTATAACAAGAAATTTGCAGAACTTTCAGGGAATGACATATTCCAAGGTGATGCGCCACCCTCATCTGCTGAGAAATCATTGAGTGGGGCTAAACTACGAGAGATGAGTGGCAGTAACATCTTTGCTGATGGGAAGGTAGAAGCTAGAGACTACCTAGGTGGCGTACGGAAACCACCCGGTGGCGAGAGCAGCATTGCCTTGGTATAA 864 0.4931 MERSTPVRKPHASTADLLTWSETPPADSPAPPSSAVRSHQPSDGIRKVVFGGQVTDEEVESLNKRKPCSEYKMKEITGSGIFVANGEDDASEAGSANPSKTGVRMYQQAIAGISHISFGEEGSISPKKPTTLPEVAKQRELSGTLESEDSILQKQLSDAKCKELSGHDIFAPPPEIKPRPITPRILELKGSIDIGERHADGDQGDTDSAGEPMKTAKKIYNKKFAELSGNDIFQGDAPPSSAEKSLSGAKLREMSGSNIFADGKVEARDYLGGVRKPPGGESSIALV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3093 287 MobiDBLite consensus disorder prediction 120 150 - -
Ssu1g3093 287 Pfam Protein of unknown function (DUF4057) 3 285 IPR025131 -
Ssu1g3093 287 MobiDBLite consensus disorder prediction 194 213 - -
Ssu1g3093 287 MobiDBLite consensus disorder prediction 1 47 - -
Ssu1g3093 287 PANTHER N-LYSINE METHYLTRANSFERASE 1 287 - -
Ssu1g3093 287 PANTHER N-LYSINE METHYLTRANSFERASE 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3093 Ssu-Chr1 80928449 80931247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3093 - - gmx:100799950 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3093 1 80928449 80931247 Ssu1g3093 1 80928449 80931247 ECH