Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3092 ATGGCCATAGGCGCAGCAGTTGCCGGTATATACGCGCTCACTCCAACACTCTCTTCATTCAAGCACCGCACGCGCCTCTTCTCACGCGCTGCTTTCGCTGCAACAAAGCTTCGACTTCCACTTCCGCTTCGAGCTTCTTCTTCCACGGCCTTCCTCGACACCGAAACCAAACCAACAGATTCCATCGTAGTTGAAAAGGAAGTAAGCAAGAGCAGCAACTCGTTGGCGTGTCCCGTATGTTACGATTCCTTGACATGGAACGGTGATCCTGGTTTGTCCGTAGATACTATCCCTGGATCTAGTTTTCAATGTAGCACCTGTCAGAAAACATATGTTGGTAACCAAACTCATCTCGATCTCACCGCAACAGGTGGAGCTAAGAGCTACGGTGAAACGATGCCAGTTTCCACAGAGCTTTTCAGGGTGCCATTGATATCATTTCTCTATGAGAGGGGCTGGCGTCAAACCTTTTCTGTGTGGGGTGGTTTTCCAGGTCCTGAGAAAGAGTTTGAGTTGATGAAGGGTTTCTTAAAGCCAGTATTGGGTGGAAATATCATTGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTGTTTTCTTTCGTTGTTGCTCTAGACTACTCGGAAAACATGTTGCAGCAATGTTATGAATTCATTCAGCAGGAAGAAAACTTTCCAAAAGAGAACTTCATCTTGGTTAGAGCAGACATATCTAGGCTCCCTTTTGTTTCCAGTTCTGTTGACGCTGTACATGCAGGTGCAGCTCTCCACTGTTGGCCTTCACCATCAGCAGCTGTAGCTGAAATAAGTCGTGTTTTACGACCTGGAGGAGTATTTGTTGCAACCACCTACATACTTGATGGGCCTTTTTCTGTTATCCCATTTTTAAGTACACTACGTCagAATGTAAGGCAAGTGTCTGGGAGCTACATCTTTCTCTCTGAACGTGAACTTGAAGATCTCTGCAGGGCGTGTGGATTGGTTGGATTTAAATGCATTAGAAATGGGTTTTTTGTGATGATTTCTGCTACAAAGCCCAGTTAA 1062 0.4501 MAIGAAVAGIYALTPTLSSFKHRTRLFSRAAFAATKLRLPLPLRASSSTAFLDTETKPTDSIVVEKEVSKSSNSLACPVCYDSLTWNGDPGLSVDTIPGSSFQCSTCQKTYVGNQTHLDLTATGGAKSYGETMPVSTELFRVPLISFLYERGWRQTFSVWGGFPGPEKEFELMKGFLKPVLGGNIIDASCASGLFSRLFAKSGLFSFVVALDYSENMLQQCYEFIQQEENFPKENFILVRADISRLPFVSSSVDAVHAGAALHCWPSPSAAVAEISRVLRPGGVFVATTYILDGPFSVIPFLSTLRQNVRQVSGSYIFLSERELEDLCRACGLVGFKCIRNGFFVMISATKPS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3092 353 PANTHER OS08G0411200 PROTEIN 47 352 - -
Ssu1g3092 353 Pfam Methyltransferase domain 187 286 IPR013216 GO:0008168
Ssu1g3092 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 343 IPR029063 -
Ssu1g3092 353 PANTHER METHYLTRANSFERASE 47 352 - -
Ssu1g3092 353 Gene3D Vaccinia Virus protein VP39 140 351 IPR029063 -
Ssu1g3092 353 CDD AdoMet_MTases 184 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3092 Ssu-Chr1 80888863 80892055 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3092 - - gmx:100819297 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3092 1 80888863 80892055 Ssu1g3092 1 80888863 80892055 ECH