Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3089 aTGATGAAATTAGGAAGAGAAGGCAAAGTACAAGCAGCACCCTCTGCAGATCTATTAGTATGTTTCCCATCTCGGGCTCATCTCACTCTAATGCCCAAGCCCATATGCAGCCCAGCCAGGCCCGCAGAGCCCAACAAACGCCACCACAACAGCCACCACCACCGCAAGAAATCGTTCTCCCGAGGAGGCGGCCAAGCGAGCCCTCTACTATGGACCAAAACCAAGTCAATGGGCTCAGAAATCATGGAACCAACATCCCCCAAAGTCACGTGCGCCGGACAGATCAAGGTCCGGCCCAAAACCACCGCTTGCAGGAGCTGGCAATCGGTGATGGAAGAGATAGAGAAAATCCACACTGACAAGAAACAGAGGAAGCGTCTCAGCTGGGCCGAGTCAGTCGGTTTCAAGAAGGAGGTAATGCAGTTCCTGACTTGTTTACGAAGCATAAGGTTCGACCTGCGATGCTTCAGGTCCTTCTCCGGAACCGACATCGCCACGGAAGAAGACGAGGATGATGATGACGAAgtcgaagaagaagaaaaccacGTGGGTGTGGAAGAAAGCGACAACGAAGCATCGAGAACCGTTTTCTCGAAATGGTTCATGGTGTTGCAAGAGGAACAAACCAACGGGGTTCGCAGAGAAGAGACAGAGGAGAGACGCAATGACGAGGAGACTGTCTCTGTCTCTGTGTCTGTACCTCCTCCGAACGCATTATTGCTCATGCGCTGTAGGTCTGCTCCCGCGAAAAGTTTGGCGAGAGAGAGTGGAGGCGATCATCATGAACAAGAGGGAAAAGAGGAGAGtgcagagagagaaaaagaaaaagaaaaagaaaaagacgtGCTGCTGGGAAAGAAGGGGCAGAGTTTAAAGTCGTTGAtggaggaagagaagagaaagagggagAATCTGGTGGTGATGCGATACGACTCTGATTTTTACGACATTTCGTCTGAGGTTGCCAAAGAGACGTGGATTGTTGGGGGACTCAGCGATCTCATGTCCAGGAGTCGAAGTTGGAAAAGATGA 1032 0.4738 MMKLGREGKVQAAPSADLLVCFPSRAHLTLMPKPICSPARPAEPNKRHHNSHHHRKKSFSRGGGQASPLLWTKTKSMGSEIMEPTSPKVTCAGQIKVRPKTTACRSWQSVMEEIEKIHTDKKQRKRLSWAESVGFKKEVMQFLTCLRSIRFDLRCFRSFSGTDIATEEDEDDDDEVEEEENHVGVEESDNEASRTVFSKWFMVLQEEQTNGVRREETEERRNDEETVSVSVSVPPPNALLLMRCRSAPAKSLARESGGDHHEQEGKEESAEREKEKEKEKDVLLGKKGQSLKSLMEEEKRKRENLVVMRYDSDFYDISSEVAKETWIVGGLSDLMSRSRSWKR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3089 343 MobiDBLite consensus disorder prediction 165 185 - -
Ssu1g3089 343 Coils Coil 260 280 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 37 67 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 250 285 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 209 226 - -
Ssu1g3089 343 PANTHER OS09G0370000 PROTEIN 5 343 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 254 285 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 208 230 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 165 191 - -
Ssu1g3089 343 MobiDBLite consensus disorder prediction 46 60 - -
Ssu1g3089 343 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 5 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3089 Ssu-Chr1 80802406 80803437 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3089 - - gmx:100814916 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3089 1 80802406 80803437 Ssu1g3089 1 80802406 80803437 ECH