Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3071 ATGGGAGTACAAGGCACTTTGGAATACTTCTCTGACTTACTTAGCAGcaccaagaagaagaagaagaagaagcaaatccAAACTGTAGCTCTGAAAATAAGAATGGACTGTGAAGGCTGTGCACGCAAAGTTAAGCATGTCCTTTCTGGCGTTAAAGGAGCTAAATCGGTGGAAGTGGACTTGAAGCAGCAGAAAGCAACAGTGACAGGATATGTTGAGCCAAAGAAAGTGCTTAAGGCTGCTCAGTCTACTAAGAAGAAGGTTGAACTGTGGCCATATGTTCCATACACTATGGTGGCTAACCCTTATATTTCTCTAGCCTACGATAAGAAGGCACCTCCTAATATGGTGAGGAAGGTGGCTGACACTGCCAAAATACCAGAAACCACCATGGACGACCGCTACATACAAATGTTCAGTGATGAAAACCCAAATGCCTGCTCTatcatgtaa 453 0.404 MGVQGTLEYFSDLLSSTKKKKKKKQIQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEPKKVLKAAQSTKKKVELWPYVPYTMVANPYISLAYDKKAPPNMVRKVADTAKIPETTMDDRYIQMFSDENPNACSIM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3071 150 Gene3D - 13 92 - -
Ssu1g3071 150 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 24 3 150 - -
Ssu1g3071 150 SUPERFAMILY HMA, heavy metal-associated domain 27 92 IPR036163 GO:0046872
Ssu1g3071 150 Pfam Heavy-metal-associated domain 33 86 IPR006121 GO:0046872
Ssu1g3071 150 ProSiteProfiles Heavy-metal-associated domain profile. 35 90 IPR006121 GO:0046872
Ssu1g3071 150 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 150 IPR045181 GO:0046872
Ssu1g3071 150 CDD HMA 35 89 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3071 Ssu-Chr1 80202489 80203043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3071 - - gmx:100782955 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3071 1 80202489 80203043 Ssu1g3071 1 80202489 80203043 ECH