Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3065 ATGACTCATAGTGTTCTAAAAGCAAGTAGATTCCCCTATCCACCTGGAGAAGTCCTTGGTTTGACCATTGCCATTAGTGGTTGTGTTTGTCATTCAGCATTTAGTTCAATGAAAGAAACCAATTCTAAAGTGGATTCTAGTTCGTGTACTCTTGCCCCCAGTTGGGAACCCTGCATTTCAGATTCCTTATCAGTCAGTGGGAACTTTACCACTTCATCTATGAGTGTAAAATCCACCcctgaaattgaaaaaaagtttGTGCATCATGTTTATGATGCCATTGCTCCACATTTCAGTTCCACCCGGTTCGCCAAGTGGCCAAAGGTTGCAGCATTTTTGTCATCTTTGCCTTTGGGATCTCTGGTCCTCGATGCCGGATGCGGGAATGGGAAATACTTAGGCTTGAATCAAGATTGCTTTTTTATAGGATGTGATATAAGTCCTTCCTTGATTAAAATCTGCTCGGATAGAGAGCATGAAGTTCTGGTTGCAGATGCTGTGAATCTTCCTTACAGAACTGGTTTTGGCGATGCAGCGATATCTATAGCTGTGTTGCATCATTTAAGCACTGAAAATAGAAGGAGAAAGGCAATAGAAGAATTGGTCAGGGTTGTTAAAAAGGGTGGCCTTGTTCTGATTACAGTTTGGGCCGTAGAGCAAGAGGATAGAACACTGATTACCAAATGGACTCCACTGACTGAGAAGTATGTTGAAGAGTGGGTAGGACCAGGAAGTCCTCGTGCTCGGGCCCCCTCATCCTTATCATTAGAAAGTATTCCAGAAAGCGAGGAGAGTAGCTCTGGCGAGCACATGAAAGTTTGCAATGAGTCAAATGTATCAAGAGATTTGGAGGAGGAGAAAAATGTAAAGAATCAACAGGAATACTTTGTTCCTTGGCATTTACCTTATCATCGTGCTGAAATAAGTGGTGCTTCTGCACACGCTCTTGCTACTGGTCTAGCAACTAAAGATGACAAAAAAGGTGCTGTGGTGTATAATAGATATTATCATGTTTTTAGTGAAGGGGAGCTTGAAAGTTTGACAACTGGAATAAACAATGCTAGAATCGTTGATCAGTTTTTTGATAAATCCAACTGGTGTATTATTCTAGAGAAGATGGTATGA 1125 0.4098 MTHSVLKASRFPYPPGEVLGLTIAISGCVCHSAFSSMKETNSKVDSSSCTLAPSWEPCISDSLSVSGNFTTSSMSVKSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVAAFLSSLPLGSLVLDAGCGNGKYLGLNQDCFFIGCDISPSLIKICSDREHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDRTLITKWTPLTEKYVEEWVGPGSPRARAPSSLSLESIPESEESSSGEHMKVCNESNVSRDLEEEKNVKNQQEYFVPWHLPYHRAEISGASAHALATGLATKDDKKGAVVYNRYYHVFSEGELESLTTGINNARIVDQFFDKSNWCIILEKMV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3065 374 PANTHER UNCHARACTERIZED 71 367 - -
Ssu1g3065 374 PANTHER BNAA05G09210D PROTEIN 71 367 - -
Ssu1g3065 374 Gene3D Vaccinia Virus protein VP39 98 373 IPR029063 -
Ssu1g3065 374 MobiDBLite consensus disorder prediction 242 273 - -
Ssu1g3065 374 CDD AdoMet_MTases 122 218 - -
Ssu1g3065 374 Pfam Methyltransferase domain 123 213 IPR013216 GO:0008168
Ssu1g3065 374 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Ssu1g3065 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 237 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3065 K10770 - gmx:100784028 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3065 1 80090440 80092228 Ssu1g3065 1 80090440 80092228 ECH