Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3045 ATGGCTAAAGTTGGTAAGTCGCGGTGCAAGTCTCGATCTCGAGGTCAGAGGGCAACCCCGTATCTTTTGTCTTGTGCAAGAAAAAATCTGAAAGATGCTAATGTAAAGAAGAGCTCTTCTAAAGCATCGGAAAAGAAAGATTGGGAAGATGCAACCTGCTCAGTCTGTATGGAGGTCCCCCACAATGCTATCCTTCTCCTTTGTTCATCTTATGACAAGGGTTGTCGCCCTTACATGTGTGCTACTAGTCATCGCTATTCAAACTGTTTTGAACAATACAAAAAGGCATATACTAAAGCAACATCTGTTCAAAGTTTGCAGCTAGAAgcaaacaattcaaattatgatttaagCACTGGTGAATCTAAAGACAATACTGAAGTTCCCAAGCTTCTTTGCCCCCTTTGTCGCCGGCAGGTAAAAGGTTGGACAGTGGTTGAAGCTGCACGGAAGTCTCTGAATGCCAAGAAAAGAAGTTGCATGCAAGATGATTGCTCTTTTGTGGGGAATTACAAGGAGCTTAGGAAACATGTTAGGTCTAAGCATCCATTTGCACGACCACGAGAAGTGGACccaataagagaagaaaaatggaaGAGACTTGAGTGTGAAAGAGAACGAAATGATGTGATTAGCACAATTTTATCTTCAACACCAGGGGCTATGGTACTGGGGGATTATGTGCTGGAGCCAAATGACCATGCCTTTTATACTGATGAGTATGATTCTGATGAGGAATATCTAGAGGATGATTTCTTCTCGGTGAGGTCCTTTGGTTTGGGGAGGACTGGCCGCTTTTTGCCAAACATTATGTATAATCAGGACCGAGCTGCTGATTCTTTCGATGTTGATCGTTTTGGTTTGCAGAGTGTTGCATCTACAGGTTCTGCTGCTGTCTCTGGACGCGGACTCCACAGGATACTGTTAGGAAGGTCTAGAAGACGACGGAGGCATAGGATAGTAAATGCAAGAAGGTAA 978 0.4202 MAKVGKSRCKSRSRGQRATPYLLSCARKNLKDANVKKSSSKASEKKDWEDATCSVCMEVPHNAILLLCSSYDKGCRPYMCATSHRYSNCFEQYKKAYTKATSVQSLQLEANNSNYDLSTGESKDNTEVPKLLCPLCRRQVKGWTVVEAARKSLNAKKRSCMQDDCSFVGNYKELRKHVRSKHPFARPREVDPIREEKWKRLECERERNDVISTILSSTPGAMVLGDYVLEPNDHAFYTDEYDSDEEYLEDDFFSVRSFGLGRTGRFLPNIMYNQDRAADSFDVDRFGLQSVASTGSAAVSGRGLHRILLGRSRRRRRHRIVNARR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3045 325 Pfam Protein of unknown function (DUF1644) 49 212 IPR012866 -
Ssu1g3045 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 186 IPR013083 -
Ssu1g3045 325 PANTHER BNAC03G28140D PROTEIN 1 319 - -
Ssu1g3045 325 PANTHER OS01G0612600 PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3045 Ssu-Chr1 79762572 79763549 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3045 - - gmx:100812579 536.954