Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3041 ATGCGCCAAGCACTTCTATGCGAAGGCCCAGGTGACGCAGAAAGAGACACGCACAAGCCATTTACCGGTCGTAGCCGGTCACAAGGCGGAAGCCGAAGAGTGACGCCGAGCGAGGAGGTTGGTAGCAGCGTGGAGAAGCAGTTGCCGAACGGTGACGTGTACATGGGGAGCTTCTCGGGCAACGTGCCGAGCGGATCGGGGAAGTACCTGTGGAAAGACGGGTGTATGTACGAGGGCGAGTGGAGGAGAGGGAAAGCGTGCGGGAAAGGGAAGTTCTCGTGGCCTTCGGGGGCGACCTACGAGGGGGAATTCAAATCGGGTCGGATGGAGGGGTTCGGCACGTTCACCGGATCCGAGGGCGACACGTACCGCGGGTCGTGGAGCTCCGACCGGAAGCACGGGTACGGCCAGAAGCGTTACGGGAACGGGGATTTCTACGAGGGGTCGTGGAAGCGGAACGTGCAGGAGGGGGAGGGGAGGTACGTGTGGAGGAACGGGAACGAGTACTACGGGGGGTGGAAGAACGGCGTCATTTGCGGGCGGGGGACGCTGATTTGGGCCAACGGGAACCGTTACGAGGGGCAATGGGAGAACGGGCTTCCCAAGGGGCAAGGGGTTTTTACGTGGCCCGACGGGAGCTGCTACGTTGGGTGCTGGAACAAGGACCTTAAGGTGCACCAGCTTAACGGGACGTTTTACCCCGGGAGTGGGGATAGTTTTACAATGAGGAAGCGGTCTTCCCTTGACACTGCCAGAGGGAGCGTTGCCgagaagagttttgcttttccCAGGATTTGCATCTGGGAATCCGAGGGTGAAGCGGGGGACATCACGTGTGATATAATCGATAATGTCTCGTTGTTGTATCGGGATGGAAGTGGAACCGGCTCGGATCGGCGAGATGTTAAGCCGTTTCGCCGGAATCCTTGTTGTTTTTCCGGCGAGGTGAAGAGACCGGGCCTGACTATATCCAAGGGACATAAGAATTATGATCTAATGCTTAACCTGCAATTGGGTATAAGGTACTCTGTTGGGAAGGAAGCTTCCTTTTCGCGAGAGCTTAAGCCGAGTGATTTTGATCCGAAGGAGAAGTTCTGGACAAGGTTTCCCACGGAAGGATCTAAGATTACGCCACCGCATCATTCAGTGGAGTTCCGCTGGAAGGACTACTGCCCTATGGTTTTTAGACAATTGAGGAGGCTATTTCAGTTGGATCCTGCTGATTACATGTTAGCTATATGTGGGAATGATGCCCTGAGGGAGCTTTCCTCTCCAGGGAAAAGTGGAAGCTTCTTCTACTTGACCCAGGATGACAGATTTATGATAAAGACGGTGAAGAAATCCGAAGTCAAGGTTGTGCTTCTTCGGATGCTTCGAAGCTATTACCAACACATTTCCAAATATGAGAATTCACTTGTGACAAAATTCTATGGAGTACATTGTGTCAAACCAATTGGAGGCCAAAAGACACGCTTTATTGTGATGGGCAATCTTTTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAAGGATCTTCACACGGCCGTACAACAGATAAGACCAAGGAGGAAATCGATGAAACTACCACCCTCAAGGACCTGGATCTCAATTTTGTGTTTTGTCTACAAAAAAATTGGTTCCAGGGTCTCATCAAACAAGTTGGGCGGGATTGTGAGTTCTTGGAAGCCGAGGGAATTATGGATTACAGTCTTTTAGTTGGCCTACATTTTCGTGATGATAACACGTATGAAAAAATGGGATTGTCACCGTTTCTTTTGCGCACTGGTATTGATCCGTATTTCATTTCAGTGCATATAGTAGATAATGTTTCCGTGACAGTAAGtgttaaaagttattttgttgTTGCCTCTCATAGGAAAACGGGATTCTTATCAGAGAAATCATTGATTAGGTTAGGAGCCAATATGCCTGCAAGAGCAGAGCGCATGTCTCGGAGGAGTGATTTTGATCAATACACCACTGTTGGAATCAGCCACTTGCCCCCTTACTGCAGTGGGGAAACTTACGatgttgttttatattttgggATTATTGACATTTTGCAAGATTACGATATCAGCAAGAAACTGGAGCATGCTTACAAGTCCTTACAGGTTGACCCTTCATCTATCTCAGCTGTTGATCCAAAGCTCTACTCAAAAAGGTTCCGGGATTTTGTGGGTAGAATATTCATTGAAGACCGGTAA 2214 0.4874 MRQALLCEGPGDAERDTHKPFTGRSRSQGGSRRVTPSEEVGSSVEKQLPNGDVYMGSFSGNVPSGSGKYLWKDGCMYEGEWRRGKACGKGKFSWPSGATYEGEFKSGRMEGFGTFTGSEGDTYRGSWSSDRKHGYGQKRYGNGDFYEGSWKRNVQEGEGRYVWRNGNEYYGGWKNGVICGRGTLIWANGNRYEGQWENGLPKGQGVFTWPDGSCYVGCWNKDLKVHQLNGTFYPGSGDSFTMRKRSSLDTARGSVAEKSFAFPRICIWESEGEAGDITCDIIDNVSLLYRDGSGTGSDRRDVKPFRRNPCCFSGEVKRPGLTISKGHKNYDLMLNLQLGIRYSVGKEASFSRELKPSDFDPKEKFWTRFPTEGSKITPPHHSVEFRWKDYCPMVFRQLRRLFQLDPADYMLAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVVLLRMLRSYYQHISKYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKTKEEIDETTTLKDLDLNFVFCLQKNWFQGLIKQVGRDCEFLEAEGIMDYSLLVGLHFRDDNTYEKMGLSPFLLRTGIDPYFISVHIVDNVSVTVSVKSYFVVASHRKTGFLSEKSLIRLGANMPARAERMSRRSDFDQYTTVGISHLPPYCSGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFVGRIFIEDR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3041 737 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 49 166 - -
Ssu1g3041 737 PIRSF PIP5K_plant 11 243 IPR017163 GO:0005524|GO:0016308
Ssu1g3041 737 PIRSF PIP5K_plant 235 737 IPR017163 GO:0005524|GO:0016308
Ssu1g3041 737 Gene3D - 129 175 - -
Ssu1g3041 737 Gene3D - 176 233 - -
Ssu1g3041 737 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 414 731 IPR002498 GO:0016307|GO:0046488
Ssu1g3041 737 Gene3D - 49 128 - -
Ssu1g3041 737 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 27 736 IPR023610 -
Ssu1g3041 737 MobiDBLite consensus disorder prediction 23 44 - -
Ssu1g3041 737 Pfam MORN repeat 192 213 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 54 76 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 100 122 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 146 167 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 123 144 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 77 98 IPR003409 -
Ssu1g3041 737 Pfam MORN repeat 169 191 IPR003409 -
Ssu1g3041 737 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 315 497 IPR027484 -
Ssu1g3041 737 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 27 736 - -
Ssu1g3041 737 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 140 228 - -
Ssu1g3041 737 SUPERFAMILY SAICAR synthase-like 325 733 - -
Ssu1g3041 737 SMART PIPK_2 355 734 IPR002498 GO:0016307|GO:0046488
Ssu1g3041 737 CDD PIPKc_AtPIP5K_like 329 732 - -
Ssu1g3041 737 MobiDBLite consensus disorder prediction 1 54 - -
Ssu1g3041 737 Gene3D - 498 733 - -
Ssu1g3041 737 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 324 733 IPR002498 GO:0016307|GO:0046488
Ssu1g3041 737 SMART morn 52 73 IPR003409 -
Ssu1g3041 737 SMART morn 98 119 IPR003409 -
Ssu1g3041 737 SMART morn 121 142 IPR003409 -
Ssu1g3041 737 SMART morn 75 96 IPR003409 -
Ssu1g3041 737 SMART morn 167 188 IPR003409 -
Ssu1g3041 737 SMART morn 190 211 IPR003409 -
Ssu1g3041 737 SMART morn 144 165 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3041 Ssu-Chr1 79637266 79640851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3041 24 736 Acyl Lipid Metabolism Gene Families AT1G21980 71.349 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3041 K00889 - gmx:100813118 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3041 1 79637266 79640851 Ssu1g3041 1 79637266 79640851 ECH