Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3034 ATGGCGGGTGGTGGAAAGGTTTCGTTCAAAGTAACTCTGACCTCCGATCCAAAGTTACCCTTCAAAGTGTTTAGCGTTCCAGAGGCTGCGCCTTTTACTGCCGTTCTCAAATTCGCCGCCGAAGAATTCAAAGTTCCTCCCCAGACCAGCGCTATCATCACCAACGATGGTGTTGGCATAAATCCCCAGCAGAGCGCAGGCAATGTCTTCCTTAAGCATGGTTCAGAATTGCGCCTGATTCCGCGTGATAGGGTTGGTGCCTCTTTAGATGTTACGGGGTGTCTTACTGGATATTGA 297 0.4983 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASLDVTGCLTGY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3034 98 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 88 IPR005375 GO:0071569
Ssu1g3034 98 CDD Ubl_UFM1 7 81 - -
Ssu1g3034 98 Gene3D - 4 87 - -
Ssu1g3034 98 PIRSF Ufm1 1 88 IPR005375 GO:0071569
Ssu1g3034 98 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 88 - -
Ssu1g3034 98 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
Ssu1g3034 98 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3034 Ssu-Chr1 79457377 79459915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3034 K12162 - zju:107421011 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3034 1 79457377 79459915 Ssu1g3034 1 79457377 79459915 ECH