Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3024 ATGAGATTCACGCCTTCCTCCAAGTTCTTAGGCTTTTCTAATCACTTCAACAGCGTTATCGCACCCTCTTCCTCTCCAACCCTAAAGTTCCCATCTTTCATTTCCGCCACCATGTCCACTGTCTCCACTCAGAACGACACCGTCACCCAGAAAACGCATCAACCTTTTCAGGTTGCAAAGCGTTTAGAGAAGTTTCAGACAACAATCTTCACCCAAATGAGCTTGCTTGCCATCAAGCATGGAGCCATAAACCTTGGTCAAGGATTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGATCTGAACATTGCCATTACTGAGAGATTTAAGAAAGATACTGGACTAGTGGTAGACCCTGAAAAGGAAGTTACTGTTACATCTGGATGCACAGAAGCAATTGCCGCAACTATGTTAGGGTTAATAAATCCTGGTGATGAGGTTATCCTGTTTGCTCCTTTTTATGATTCTTACGAGGCCACTTTGTCCATGGCTGGCGCAAAAGTAAAAAGTATCACTCTGCGCCCTCCAGATTTTGCTGTCCCTCTTGAAGAGTTGAAGTCTGCCATCTCAAAGAATACGCGTgccattcttattaatacccCTCACAACCCTACTGGGAAAATGTTCACGCAAGAGGAGCTCAATTGCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGACAAGTTGGCATTTGATATGGAGCACATTTCAATGGCATCTTTGCCTGGAATGTATGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGTTGGGCCATAGCACCCCCACACTTAACATGGGGAGTGCGACAGGCACACGCTTTCCTCACTTTCTCAACTGCCCATCCTTTTCAGTGTGCTGCTGCAGTAGCTCTGAGAGCACCAGACTCTTACTATGTGGAGCTGAAGAGGGATTATATGGCGAAGAGAGCTATCTTGGTTGAAGGATTGAAGGCAGTCGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTAGTTAAGGAAGTGGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTGGTCAGATTTACTTTCTGCAAGGATGAGGAAACTATTAGGTCTGCTGTTGAGAGGATGAAAGAGAAACTTAGAAAATGA 1320 0.4379 MRFTPSSKFLGFSNHFNSVIAPSSSPTLKFPSFISATMSTVSTQNDTVTQKTHQPFQVAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAITERFKKDTGLVVDPEKEVTVTSGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMAGAKVKSITLRPPDFAVPLEELKSAISKNTRAILINTPHNPTGKMFTQEELNCIASLCIENDVLVFTDEVYDKLAFDMEHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFSTAHPFQCAAAVALRAPDSYYVELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETIRSAVERMKEKLRK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3024 439 SUPERFAMILY PLP-dependent transferases 57 438 IPR015424 -
Ssu1g3024 439 Gene3D Aspartate Aminotransferase, domain 1 72 433 IPR015422 GO:0003824
Ssu1g3024 439 Gene3D - 95 333 IPR015421 GO:0003824
Ssu1g3024 439 Pfam Aminotransferase class I and II 83 432 IPR004839 GO:0009058|GO:0030170
Ssu1g3024 439 PANTHER FI04487P 58 439 - -
Ssu1g3024 439 PANTHER FI04487P 58 439 - -
Ssu1g3024 439 CDD AAT_like 83 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3024 Ssu-Chr1 79243029 79244948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3024 K23977 - gmx:100818968 833.943