Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3021 ATGGAACATCAAAAGAGCGGGAGCAAGCTAACCAGGACCCACTCGTCGCTGCTTAGTTGTTCCTCCCCCGCACTCCGATCGTCCGTTCACAACCTCTCTTCCATCGTCGGCAAGGACGAACAGGAACAGGAACAGGAACACGAACTCCTCCTCGATGTCGACGACGACAAGAACAAGAAGAACAAGAAACCCCAAGCCCAACTCCAAGCCCGAGCCCAGGCCCAGAGATCCTCCTCGTATCCCACCCTGGCGGTGTTTTGCCTCGGCGCGGGTTCGCTCTTCTTCTACTTCTTCTACCTGGAGGTGTCCTCTTCGGAGAACGTGTTGCTGGCGCTGATTTTCGTGGCCGTGGCGCTCTACCTGGTCTCGAGGAACAAGGCTCTGATCCACCACTCCTATTCCCTGCTGAAGCATTCGTGGGAGGAGAATGTGCGGCGGTTGGGGTTTTCGAAGACGGCGGCGGCGGCGAGGCCGGTGCAGTGGTTCATCGGGGAGTCGGCGGCGGAGGCGGCGGCGAGGAAGGCGAAGATAGTGAGGGAGGGGGTGGAGTTTTACAGCAATGGGGATTTTTACGAGGGGGAGTTTCACAAGGGGAGGAGCAACGGGAGCGGGGTGTACCATTACTTCGTGAATGGGAGGTACGAGGGCGATTGGGTGGACGGGAGGTACGATGGGCACGGGATTGAGAGCTGGGCCAGGGGGAGTCGCTATAGGGGTCAGTATAGGCAGGGCTTGAGGCATGGTTTTGGGGTTTATAGGTTCTACACGGGGGACTCTTATTCGGGGGAGTGGTCTAACGGTCAGAGCCATGGCCTGGGCCTTCAGACTTGCTCCGATGCTAGCTGTTATATTGGTCAGTTTAAGTATGGTGTCAAGCACGGACTTGGTGTTACCATTTTAGAAATGGAGATAGATATGCTGGGGAGTATTTTGGAGACAAGATACATGGATTTGGGGTCTACCACTTTGCCAACGGCCACTGTTATGAGGGAGCATGGCACGAGGGTCGTAGGCAAGGTATGGGCTCATACACTTTTCGAAACGGTGACCGGAGATGTGGTGAATGGGATGCTGGCAACCTCAAGCAATCTCTACCACCACTATCTGATATTGTTCTTCGAGCAGTTCAGGTACTTGTTATGGACATTTATTTGTTACCTATCAATATCACGGTTGCCTTCTTGTTATAATCCCTTTAGaaatgttcttttttcttttttttctcatatctcCTAA 1236 0.5275 MEHQKSGSKLTRTHSSLLSCSSPALRSSVHNLSSIVGKDEQEQEQEHELLLDVDDDKNKKNKKPQAQLQARAQAQRSSSYPTLAVFCLGAGSLFFYFFYLEVSSSENVLLALIFVAVALYLVSRNKALIHHSYSLLKHSWEENVRRLGFSKTAAAARPVQWFIGESAAEAAARKAKIVREGVEFYSNGDFYEGEFHKGRSNGSGVYHYFVNGRYEGDWVDGRYDGHGIESWARGSRYRGQYRQGLRHGFGVYRFYTGDSYSGEWSNGQSHGLGLQTCSDASCYIGQFKYGVKHGLGVTILEMEIDMLGSILETRYMDLGSTTLPTATVMREHGTRVVGKVWAHTLFETVTGDVVNGMLATSSNLYHHYLILFFEQFRYLLWTFICYLSISRLPSCYNPFRNVLFSFFSHIS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3021 411 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 185 299 - -
Ssu1g3021 411 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 20 297 - -
Ssu1g3021 411 MobiDBLite consensus disorder prediction 36 73 - -
Ssu1g3021 411 SMART morn 235 256 IPR003409 -
Ssu1g3021 411 SMART morn 212 233 IPR003409 -
Ssu1g3021 411 SMART morn 258 279 IPR003409 -
Ssu1g3021 411 SMART morn 189 210 IPR003409 -
Ssu1g3021 411 SMART morn 281 302 IPR003409 -
Ssu1g3021 411 Pfam MORN repeat 260 279 IPR003409 -
Ssu1g3021 411 Pfam MORN repeat 237 258 IPR003409 -
Ssu1g3021 411 Pfam MORN repeat 283 297 IPR003409 -
Ssu1g3021 411 Pfam MORN repeat 214 236 IPR003409 -
Ssu1g3021 411 Pfam MORN repeat 191 208 IPR003409 -
Ssu1g3021 411 MobiDBLite consensus disorder prediction 37 63 - -
Ssu1g3021 411 Gene3D - 266 306 - -
Ssu1g3021 411 Gene3D - 221 265 - -
Ssu1g3021 411 Gene3D - 176 220 - -
Ssu1g3021 411 PANTHER HISTONE H3 K4-SPECIFIC METHYLTRANSFERASE SET7/9 FAMILY PROTEIN 20 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3021 Ssu-Chr1 79209318 79211155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3021 169 393 Acyl Lipid Metabolism Gene Families AT1G77740 27.160 2.23e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3021 - - gmx:100818442 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3021 1 79209318 79211155 Ssu1g3021 1 79209318 79211155 ECH