Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3019 ATGGGTTTCTCAAAGGAACACCTTCTTGCGCGGTTAAAGGAGCTTCAGATTCCATTTTCCCAGTATGAGCATCCAgttgttttgaccgttgacGCTCAGGCTCAATATGTTGGACATCTCGGGGGCGGGCtgagtaaaaatttatttctcaaggACAAGAAAGGCAGGTTGTATATTGTTTCTGCTTTAGCTGGTACCAAAGTAGATCTCAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTGAGAATGGCACCTGAGGAGGCTTTAGGTGAAGTACTTCAGGTACCCTTGGGTTGTGTCACTCCATTTGCACTAGTGAATGAATCAGCACGAGATGTTTCACTGCTATTGGATCAAGGGTTCAAGACTCAGAAGCACTGCTTCTTCCATCCACTGTCGAATGACATGTCCATATCTCTAAATGCATGTGATCTTGACAACTTTCTTAAATCAATAGGAAGAAATCCCTCATACGTTGATTTGGAGGCCAATCCTACAGTGGGGAAAGATCAACCCCCTGATCTAGCTGCCCTAGTTCCATCCAGTTCAACAGTTTTACCCGATCAACCACAAAAGCAATCTTCTTCACAGGTTCCTAAGGATGCAAACCATGTTTCTGTGGGTAATGGAACCAATACAGTTTCAGTCAAAGTTGTCGAGCGATCCTCTAGTGGGCAAAGTACAAAGGGGACACCGGTAAAAAATGTTAAGTCATCAGGCTCCTTTGCAGATGTTGGACAATTCGTTGAAGAGATATTGCAAAAAACGTCACAATTATTGCTTTCAGAGGTCAAGGAAGAAAATGTGAAGTTACACGGGGAGCAGCTGGGTACTGTGGTATCTGACAAACTACAGAAAAACCTTAGCTCAGAGTTTAAGAACCTTGCTATGATATTTAAGAACACAGCATATACAGAAGGGTTCCATGCTGGTACTCATTATCACCCCCAGCGCTTGTGA 969 0.4221 MGFSKEHLLARLKELQIPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKGRLYIVSALAGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQGFKTQKHCFFHPLSNDMSISLNACDLDNFLKSIGRNPSYVDLEANPTVGKDQPPDLAALVPSSSTVLPDQPQKQSSSQVPKDANHVSVGNGTNTVSVKVVERSSSGQSTKGTPVKNVKSSGSFADVGQFVEEILQKTSQLLLSEVKEENVKLHGEQLGTVVSDKLQKNLSSEFKNLAMIFKNTAYTEGFHAGTHYHPQRL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3019 322 CDD PrdX_deacylase 5 162 - -
Ssu1g3019 322 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 320 IPR040285 -
Ssu1g3019 322 MobiDBLite consensus disorder prediction 166 215 - -
Ssu1g3019 322 Pfam Aminoacyl-tRNA editing domain 24 150 IPR007214 GO:0002161
Ssu1g3019 322 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 320 - -
Ssu1g3019 322 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
Ssu1g3019 322 Gene3D - 2 171 IPR036754 GO:0002161
Ssu1g3019 322 MobiDBLite consensus disorder prediction 185 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3019 Ssu-Chr1 79184397 79190628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3019 - - gmx:100817904 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3019 1 79184397 79190628 Ssu1g3019 1 79184397 79190628 ECH