Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3016 ATGGTGGTTGCAAGCGCGGTGGCAGCGTTTGGAGTAGCAAGGCCCTCGCCACTTTTGTTGTTAACAGGACAAAGGGCTTTCAAATTCAGACCCCTCTCTTCTTCATCTGCTGCACCTTCTAGAAAGCTCGTCCTCTACTCAAAACCCGGTTGCTGTTTGTGCGATGGCCTCAAAGAGAAGCTTCAAGCTGCATTCCTACTCTCGGGCCCTGATTCCCTTAACGACGTCGAATTGCAGATAAGGGATATAACCAGCAATCCCGAGTGGGAAAGCGCTTACCAATATGAGATACCTGTGCTGGCTAAAGTGCTTTCCGACGGCGCTGAGGTGGCTTTACCGCGATTGTCCCCACGTCTAGGAGTGGAGCTCCTTCAGAAGAAGATAGCGGCTGCTCTGAAACAACAATAA 408 0.5098 MVVASAVAAFGVARPSPLLLLTGQRAFKFRPLSSSSAAPSRKLVLYSKPGCCLCDGLKEKLQAAFLLSGPDSLNDVELQIRDITSNPEWESAYQYEIPVLAKVLSDGAEVALPRLSPRLGVELLQKKIAAALKQQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3016 135 SUPERFAMILY Thioredoxin-like 38 124 IPR036249 -
Ssu1g3016 135 Gene3D Glutaredoxin 36 126 - -
Ssu1g3016 135 Pfam Glutaredoxin-like domain (DUF836) 42 128 IPR008554 -
Ssu1g3016 135 PANTHER GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG 32 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3016 - - gmx:100306069 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3016 1 79142688 79149983 Ssu1g3016 1 79142688 79149983 ECH