Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3007 ATGTGTAAAGATGCTGAAGTGGACTTGGAGGTGGATGAATCTATTACTGCAACTGTGCACGCTGGCGTTTTTAGAAAGTCAGATACTGAACCACTGAGTAGATTTCTTCAAGAAAGTATGAAATCATACTACCGTAGTTGTGTGGATCAGGCGGAGGGTAGCTTATGGACATACAAATACAAGCCAACAAAGGCTGTtgaggtaTGCGGTAATGATGAATCTGTAAACTTCTTGCGTGACTGGCTACATCTTTGGCATGAAAGACGTTATAAAAGCCAGAAGGATACCTCTGACATGATAAAGgaatgttga 312 0.3942 MCKDAEVDLEVDESITATVHAGVFRKSDTEPLSRFLQESMKSYYRSCVDQAEGSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSQKDTSDMIKEC 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3007 103 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 3 98 IPR004582 GO:0006281
Ssu1g3007 103 Gene3D - 53 102 IPR027417 -
Ssu1g3007 103 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 3 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3007 Ssu-Chr1 78785937 78787935 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3007 - - gmx:100784968 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3007 1 78785937 78787935 Ssu1g3007 1 78785937 78787935 ECH