Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3004 ATGCTCAGTTCTTCAGCTTCGTTTTTGAGACAGTTGAGTGCAAAGGAGGCTTGGAAATCAACTTCCAACCGGTGGAGTGGGAAAGAGAGATATATTAGTAGTGGTTGGGGAGTGAGCGTTGGTGGGTGTGAGGGGAATCTGAATCAAATGGAAGGGTTTGACATGCACGGGAATGAGGACAGTGGGGTGATGGGGAGGAAGagggtgatggtggtggttgaTGGCACTTCACATTCCAAGCATGCAATGATGTGGGCACTCACTCATGTGGTTAATAAGGGTGATTCCTTGACTCTGCTTCACATTGTCCCTCCACACAAGGGTCCTGAATCTTCTTGTTCCACCTATCTTGTCAATTATCTTGGGTGCCTTTGCAAAGATTGCAAGCCAGGGGTGGAAGTGGAAGCGCTCGTAATCCAAGGACCAAAACTGGCCACAGTAATGAGCCAAGTAAAGAAGCTGGAGGTCTCTGTCCTGGTACTGGGTCAAAAGAAGCCATCTTCTCTTTTGAGCTGTCTTTGTGGAAGCAGTGGAAGCAGTAATACAGAGGAGTTTGTGGAGCATTGCATCAATAAAGCAGAGTGCTTGACAATTGGAGTGAGGAAGAGAAGCCAGGGCACGAATGGATACCTTATCAGCACTAGGTGGCAGAAGAACTACTGGCTTTTGGCTTAG 675 0.4637 MLSSSASFLRQLSAKEAWKSTSNRWSGKERYISSGWGVSVGGCEGNLNQMEGFDMHGNEDSGVMGRKRVMVVVDGTSHSKHAMMWALTHVVNKGDSLTLLHIVPPHKGPESSCSTYLVNYLGCLCKDCKPGVEVEALVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCLCGSSGSSNTEEFVEHCINKAECLTIGVRKRSQGTNGYLISTRWQKNYWLLA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3004 224 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 224 - -
Ssu1g3004 224 Pfam Universal stress protein family 66 177 IPR006016 -
Ssu1g3004 224 CDD USP_Like 68 163 - -
Ssu1g3004 224 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 224 - -
Ssu1g3004 224 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 176 - -
Ssu1g3004 224 Gene3D HUPs 66 203 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3004 Ssu-Chr1 78764680 78765935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3004 - - gmx:100810043 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3004 1 78764680 78765935 Ssu1g3004 1 78764680 78765935 ECH