Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3003 ATGGAGGAGAGCTTTGTTTTCCAGTGGAGCGTCGTCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCTTTCAATGTCACCGTAATCATCGTCAACAAGTGGATCTTCCAGaAATTGGATTTCAAGTTTCCCCTATCAGTTTCCTGTGTCCACTTTATCTGTTCAGCTATTGGAGGATATGTGGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGATCCTGAAGATCGCTGGAGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATAGTTCTGGGGAATGTGAGTCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGCATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTCACAGAGCTTAGTTTTAATATGTTTGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACATCTACAAAGACTATTCTAGCAGAATCCCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATTTTGGCGCTTCCTGCCATGTTAATTGAAGGCAATGGAGTCCTTGAATGGTTAAATACCCATCCGTATCCTTGGTCGgctcttatcattatttttagctCCGGGGTGTTTGCTTTCTGTCTTAACTTCTCCATTTTCTATGTGATTCACTCCACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTGAGATCTATCACGCATAATGCTTCAAGCATCATGATTTTCAATTGGTTCAATTCATGTATTTTGAGAAACTGTCCATTTTTTCCCCTATTTAATACCCGGAGAAGATGTAGCCACATTATATCATCATTCCTACAAGAGATGCCTTCTCCCCTCTtgcattttgtttcattttgctTTAACACGTGCTCCCTagtttcattgaatttattaatattcattctaCGACTTTGCATGTTAGTCATTAAGTGCATGGTGGATTGTGTTAATGGTGATGTGTTTGTGTTAAAGGATTATTGA 1101 0.3797 MEESFVFQWSVVRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKHFDWRIWASLIPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAMLIEGNGVLEWLNTHPYPWSALIIIFSSGVFAFCLNFSIFYVIHSTTAVTFNVAGNLKVRSITHNASSIMIFNWFNSCILRNCPFFPLFNTRRRCSHIISSFLQEMPSPLLHFVSFCFNTCSLVSLNLLIFILRLCMLVIKCMVDCVNGDVFVLKDY 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3003 366 PANTHER SOLUTE CARRIER FAMILY 35 3 281 - -
Ssu1g3003 366 Gene3D - 66 157 - -
Ssu1g3003 366 PANTHER GDP-MANNOSE TRANSPORTER GONST5 3 281 - -
Ssu1g3003 366 Pfam Triose-phosphate Transporter family 15 281 IPR004853 -
Ssu1g3003 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3003 Ssu-Chr1 78758093 78762680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3003 1 268 Organic Solute Cotransporters AT1G77610 88.806 7.06e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3003 K15285 - gmx:100809511 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3003 1 78758093 78762680 Ssu1g3003 1 78758093 78762680 ECH