Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3001 ATGAATAGAAATGGATACAGAGAAGAAAAATCATTCTGCTATTTCCACCCCAAACAAGTCCTTGTTGGCGTGTGCCCCTTGTGCTTGAATGAGAGGCTCCTCATAGTGGCTGCAAAACAAGGTCGCCACCACAACCGTTCTTCTTCCTCTAAACCTTCTTCACACAGGCTTCAAAGTTCCAGACACAGAAGACCACCCTCTTCTATTCACAAGATCTTTGCTTTTGGTTCTCTCTTCACTCGCCCAGAATCCCACCAGTGGAAATCTCACAACTATGACTATGATGATGTCTCTCCCAGTCCAGAagAGTCGTTCATCTCAATCAAGTTTGAAGAGAATGGGGTGGCATCGTGGGAAAAGAGTACAGTGTCTAAGGTGTCCCTAGAGAACTGCAGCAAGATGTCGTGGAACCATTACAAGAAGGAcaacagcagcagcagcaacagGAGCGTGATAGAGCATGGGAAGTCACGTGACTCGTTTAGGTGGCGAAAGCGGATAGGCCACATGTTCCAGCTCATTCGGTGGAAGAAGAGCGCTGGTGTGTGCCACGTGGGCAGCAAGGTGGAGGGAGCGAAGGTGAGAAAGGGTTGGATGAGGACTCTGACAAAGAGGAAAACGACCGTGGAATAA 633 0.466 MNRNGYREEKSFCYFHPKQVLVGVCPLCLNERLLIVAAKQGRHHNRSSSSKPSSHRLQSSRHRRPPSSIHKIFAFGSLFTRPESHQWKSHNYDYDDVSPSPEESFISIKFEENGVASWEKSTVSKVSLENCSKMSWNHYKKDNSSSSNRSVIEHGKSRDSFRWRKRIGHMFQLIRWKKSAGVCHVGSKVEGAKVRKGWMRTLTKRKTTVE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3001 210 MobiDBLite consensus disorder prediction 44 65 - -
Ssu1g3001 210 Pfam Protein of unknown function (DUF740) 10 55 IPR008004 -
Ssu1g3001 210 MobiDBLite consensus disorder prediction 40 65 - -
Ssu1g3001 210 PANTHER OS04G0690500 PROTEIN 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3001 Ssu-Chr1 78717084 78718703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3001 - - gmx:100305646 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3001 1 78717084 78718703 Ssu1g3001 1 78717084 78718703 ECH