Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3000 atgtCTGCCTCTTTCTCATTCGGTCGCCACTCAATTCATCTCAAAATGGACAATTCCGTGTTTAACGGCGCACAAATTCACCACGATCGAACTTCCTCCTCCTATTCCTCTTCTTCTCAGAGGGATGTCCGCTACagCTGTGGTACTTGCGGATATGAGCTTAACCTATCCTCCTCTAACCGGAACATATCATCCATCGGTTCTAAATATGGGAAATCCATAAAGCGAGGGATTATATCATTCTTCAACGTTGATGATAGCAGATTCACCCAGGCTGACGAAACTGAATGCGTCCCATATTTTTCTAAGCACTCGTGGGGTTTGTTCCGCCGAAAAACTAAGCTTCTTTGTCGTAAGTGTTGCAACCATATTGGATATGCGTACAATTGTCACACTTCATCGTCCCTTCCTCTCGTATCAAACGGAACAGAACCATCACCTGCCACCGAAGCATCAACTCCTACCAAATATGACATCCGCATCCGTGCCTTACAGCCTTCGACTTCTTCTGAAGAATATGGAATCACTGTGTTagcttaa 540 0.4407 MSASFSFGRHSIHLKMDNSVFNGAQIHHDRTSSSYSSSSQRDVRYSCGTCGYELNLSSSNRNISSIGSKYGKSIKRGIISFFNVDDSRFTQADETECVPYFSKHSWGLFRRKTKLLCRKCCNHIGYAYNCHTSSSLPLVSNGTEPSPATEASTPTKYDIRIRALQPSTSSEEYGITVLA 179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3000 179 PANTHER - 27 179 - -
Ssu1g3000 179 PANTHER METHIONINE-S-OXIDE REDUCTASE 27 179 IPR045282 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g3000 Ssu-Chr1 78708248 78709672 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3000 - - aprc:113852771 248.44