Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2996 ATGGGTGGTGGAAAGCGGAATACGGTGGAGACATTCTTCATAGCCACTCTGATGCTGTGGCTGGGTTCCGTTTGTTTCCAGATTTTGTCGAACCAGCGCTGGGAGTTCTTCTCGGTCATCGCCGGTTCCTTCTTCTATCAGACATCTAACTGCCTCGTTcgattcttcttcttctccacgCATAAAGACCCTCTCTTCGTTAACACCTCCGTCTCGCTTCTCCACTCCCTCGTTACCTCCGCCTCAGTGATCTTCATCTTGTTCAGAGAGTTGTTGAATAATGGGTCAAGTGGAATGTTTGACCACTCACAGTTGGTTGAAAATACTTGGCCATGGGCATTTGAAGCATTGAGCTTTTCATGTGGTTACTTTGCATATGATCAGTGGGATATGCTTCGTTACCGCTTATATAATGGTTGGATCCCCTCCATCCTTGTGCATCATCTGGTTCTCCTTATTTGCTTCACTCTTGCTTTGTATCGAAATGTTACCGTCAACTACCTTATTCTCACTCTTATCTGTGAGCTGCATTCCATCTTTCTGCATGTGAGAAAAGTGAGACGAATGGTCGGTTTCCGGGATGCAAAGAGCATTCTTGTTAAGTTAGAATGGTTTCTTAATTGGGTCACCTTCTTTGTGGCAAGGTCTGCACCTCACGTTCTCATCACAGCCAAGCTCATCAGGGATGCTCACAAATTTGGAAAGGGTATGGAGCTACCACTGGCTCTGTTTGGCATGGCTGGGATGAATTTGCTCAACATTGGTCTTGGCATTGATCTCTTTAAAGCTTTTAGGAGAGAGAGGAAGTCTCTTCAGGGTAATCTTCATCACCACCGTGAATGA 843 0.4448 MGGGKRNTVETFFIATLMLWLGSVCFQILSNQRWEFFSVIAGSFFYQTSNCLVRFFFFSTHKDPLFVNTSVSLLHSLVTSASVIFILFRELLNNGSSGMFDHSQLVENTWPWAFEALSFSCGYFAYDQWDMLRYRLYNGWIPSILVHHLVLLICFTLALYRNVTVNYLILTLICELHSIFLHVRKVRRMVGFRDAKSILVKLEWFLNWVTFFVARSAPHVLITAKLIRDAHKFGKGMELPLALFGMAGMNLLNIGLGIDLFKAFRRERKSLQGNLHHHRE 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2996 280 PANTHER CT120 PROTEIN 12 273 - -
Ssu1g2996 280 ProSiteProfiles TLC domain profile. 61 272 IPR006634 GO:0016021
Ssu1g2996 280 PANTHER TLC DOMAIN-CONTAINING PROTEIN FLD-1 12 273 - -
Ssu1g2996 280 SMART lag1_27 61 266 IPR006634 GO:0016021
Ssu1g2996 280 Pfam TLC domain 66 254 IPR006634 GO:0016021
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2996 - - gmx:100786028 498.434
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2996 1 78662905 78665394 Ssu1g2996 1 78662905 78665394 ECH