Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2986 ATGGGCTGCGGCGGGTCCAAGGTGGAGGACTTCCCTGCGGTGGCTCTGTGCAGACAGCGAAAGGAGTTCCTAAAAGCCGCATCGGAGCAACGCTACGTCCTCGCCGCAGCACACGTGGCGTATTTCCATTCGCTGAGAGAAATCGGCGACGCGCTTCGCAAGTTCGCGGAGCAAGACCTCACCACCGGTTCCTCCTCTCCGGTTCTCACATTACCCAACGAAACCAAGAGCAGCAAAAACAAGCTTTCCTCTTCTTCCCCTTCCATTTCCCACGCCGATTCCCCTCCCCATTCCCCCGAGGGTTCTCACTTGCCCCTCTCCTCTGGATCCGAACTAagttctccttctccttctccttcttcttcccctCACATTCACGAAAGCCCGGAACCAGAGCCACcaccttcttctttttctcctccttaTGGGTATTATCAAAATTCCCATTACGCCCACTACATGAAGAGGTCCGTTCCTCAGGGGAGACCCGTGGTGTATGAAGAACCCGAGGGACACGTGGCAACGCCTGGGCAATGGCCCGATGCTTCCAATGGGTACGCTAACGGCGGTTTCTACGGGTTTCCGGGTGGGGGCTACCCGTATTACCCTCCCCCGGGGCCGTCGTCTTCTCCGCCGCGTCCTCCTCCGGCGCCGCCGTCGCCGCCCCGGGCCTCCACTTGGGATTTCCTCAACTTCTTCGACAGCTTCGACAACGGGTACCCGGGTTACCCCCCTCAGTTCGGGTCGAGCGCGAGCAGTCCCGATTCGAAGGaggttagagagagagaggggattCCCGAATTGGAAGACGAAACGGAACAGGAAACGGCGAAAGAGGTTCCgttaaaggagaagaaaaagctCGGGGGGGAAAAGGGCGTTGGAGGGAGGGATTTCGGGGAGGGTCCTTCCAACTCCAAAACGGTGCCGTTGCAGCAAGTGAGCAGCAGCGAGGGCAGTTCCAAGACGGTTAGGTTCCATGATGGCAGCGATAACGGCTCGGTTGAGAAAGAGATCAAGAGCAGTCCCGACACCGAAGAGCGTGGTCCGAAGAAAGGGGTGAGTTTCGAGATTGACGAGGCAACGGTCACGACGGTGGATGGTGACTCTTCCGTTTTGAGTAGCGTGACCACTTTGTCTGCGCATAGCACCAGGGATCTCCGAGAGGTTGTTCAGGAGATTCGAGATGAGTTTGTGACGGCGTCTAATTTCGGGAAAGAGGTTGCGGTGTTGCTTGAGGTTTGCACACCGCCTTATCGATCCAGGGTTGCTGCACTTAGAGTTATCTTTTCCAGAATCTTGCAGATGGTAGCACCTTCCAGGTTACCTTCACATCCTATATCTATACAATTTTCTTCTAGGGAAATAAAATTGGCACAAGCGTACTGTGGTGAACCTGGGAAAGACTTCAAGACAAATCCTGAAAACCTTTCATCTACATTGGAGAAACTTTATGCATGGGAAAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTACGAGCTATTTACGAGAAACAGTTCAAGAGACTGAAAACATTGGATAATCGAGGAGCTGAATCTAGTAAAATTGATGCTACTAGGGCATCAATAAGAAAGTtgcaaacaaaaatcaatatttgCATCAGAACTGCTGAAACTATAATGGGAAGGATACATGAATTGAGGGATAAAGAATTGCAGCCTCAACTTGTAGCATTGGTTAATGGATTCATAAGAATGTGGAAATTCATGCTCAAATGCCACCAGAAACAGTTCCAAGCTATCATGGAGAGTAAAAGTCAGTCTCTTAAGATTAACATTGGTCTGCAAGGAGATGAAGGTTTGAAGGCCATTGTTGAACTTGAAAAGGAGCTTTTGAATTGGTGCAGTCAGTTCAACAATTGGGTAAAGACTCAAAAATATTATGTCAAGAATTTGAATGAGTGGCTCATAAGGTGCCTTCCTAATGAACCTGAAGAAACAGCTGATGGTGTTGCCCCTTTCTCTCCAAGTCGGCTTGATGCTCCACCAGTTTTTATAATTTGCAATGATTGGCATCAAGCAATGACTAGAATTTCAGAAACAGGGGTGGCAGAGGCCATGCATTTATTTGCTCTAAAACTACATGAGTTATGGGAAAGGCAAGATGAGGCGCAACGCCAGAGGATCAAAGCAGATTATCTCACGAAGGACTTCGAGAAACAGCTTAGAACTTTGCGCACAGAAATGGGAGGCTCAGAACATGAGCATGATAATGTTTCAGGAAAAACTGCATTGTCGAAGCTTGCTTCTGATAGCGGTGTTTCCCCACTAGATGATCTAAAGGTGGATTTAGATtctatgaaaaagaaattgcatGAAGAGAGGGCCAGGCATAAAGAAGCCATCAAACTTGTTCGTGATGCAGCTTCTAATAGTTTACAAGCTGGTTTGATTCCCATTTTTAAGACATTAGAGAGTTTCACTACAGAGGTGGTGAAAGCTCATGAGCAAGTCAGGGTTCAAAGTAATGCTGAGGACTCGTAG 2511 0.464 MGCGGSKVEDFPAVALCRQRKEFLKAASEQRYVLAAAHVAYFHSLREIGDALRKFAEQDLTTGSSSPVLTLPNETKSSKNKLSSSSPSISHADSPPHSPEGSHLPLSSGSELSSPSPSPSSSPHIHESPEPEPPPSSFSPPYGYYQNSHYAHYMKRSVPQGRPVVYEEPEGHVATPGQWPDASNGYANGGFYGFPGGGYPYYPPPGPSSSPPRPPPAPPSPPRASTWDFLNFFDSFDNGYPGYPPQFGSSASSPDSKEVREREGIPELEDETEQETAKEVPLKEKKKLGGEKGVGGRDFGEGPSNSKTVPLQQVSSSEGSSKTVRFHDGSDNGSVEKEIKSSPDTEERGPKKGVSFEIDEATVTTVDGDSSVLSSVTTLSAHSTRDLREVVQEIRDEFVTASNFGKEVAVLLEVCTPPYRSRVAALRVIFSRILQMVAPSRLPSHPISIQFSSREIKLAQAYCGEPGKDFKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQFKRLKTLDNRGAESSKIDATRASIRKLQTKINICIRTAETIMGRIHELRDKELQPQLVALVNGFIRMWKFMLKCHQKQFQAIMESKSQSLKINIGLQGDEGLKAIVELEKELLNWCSQFNNWVKTQKYYVKNLNEWLIRCLPNEPEETADGVAPFSPSRLDAPPVFIICNDWHQAMTRISETGVAEAMHLFALKLHELWERQDEAQRQRIKADYLTKDFEKQLRTLRTEMGGSEHEHDNVSGKTALSKLASDSGVSPLDDLKVDLDSMKKKLHEERARHKEAIKLVRDAASNSLQAGLIPIFKTLESFTTEVVKAHEQVRVQSNAEDS 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2986 836 MobiDBLite consensus disorder prediction 161 355 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 329 355 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 60 121 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 275 294 - -
Ssu1g2986 836 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 831 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 122 140 - -
Ssu1g2986 836 Pfam Protein of unknown function (DUF632) 387 704 IPR006867 -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 305 328 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 60 143 - -
Ssu1g2986 836 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Ssu1g2986 836 PANTHER UNCHARACTERIZED 1 831 - -
Ssu1g2986 836 Coils Coil 766 793 - -
Ssu1g2986 836 MobiDBLite consensus disorder prediction 198 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2986 Ssu-Chr1 78457327 78462202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2986 1 717 Acyl Lipid Metabolism Gene Families AT2G27090 26.764 4.91e-54 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2986 - - gmx:100782069 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2986 1 78457327 78462202 Ssu1g2986 1 78457327 78462202 ECH