Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2982 ATGGCTTCCACAATCCCTAACGCGCCCTCTGCGCTGAATTGCCAGAGCTATGTTGGTCTCAGAGCGCCGCAGAGGAGCTTGAAGTTTAGTTTTCCTCGTGCCGCAACGAAATCTCGCCGTCCATGCCTTTTCGTCGTAAGAGCCAGCGATTCGGATTTCGAAGCCGCCGTTGTCGCCGGAAACTTGCCGCCGGCGCCTCCCGTGCCGCCCAAACCGGCGGCTCCGGTTGGAACGCCGGTGGTCCCTTCACTTCCACTTCAACGGCGTCCTCGTCGGAACCGGAGGTCGCCTGCACTTCGGTCGGCTTTCCAGGAAACGAGTATTTCGCCGGCGAATTTTGTGTATCCGCTTTTCGTTCACGAAGGTGAAGAGGATACTCCAATCGGTGCTATGCCTGGATGCTACAGGCTTGGGTGGAGGCATGGACTTGTAGAAGAGGTTGCAAAGGCACGGGATGTTGGTGTTAATAGTGTTGTGCTCTTCCCCAAAATTCCTGATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGAAAATGGTTTAGTGCCCCGGGCAATACGTCTGCTCAAGGATAAGTACCCAGACCTTGTTATCTATACAGATGTTGCATTAGATCCTTATTCGTCAGATGGGCATGATGGCATAGTTAGAGAAGATGgagttattatgaatgatgagaCGGTTCATCAGCTATGTAAACAAGCTGTAGCCCAGgcCCAAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGCGCAATGCGGGCAGCTCTTGATGCTGAAGGCTTTCAGCATGTTTCTCTAATGTCCTATACAGCaaaGTATGCAAGTTCTTTTTATGGTCCATTTAGAGAGGCATTGGACTCAAACCCCCGGTTTGGAGACAAGAAGACTTATCAGATGGACCCAGCTAATTATAGAGAGGCTCTGACCGAGATGCGGGAAGATGAATCTGAAGGAGCTGACATTCTCTTGGTGAAGCCTGGTCTTCCTTATTTGGATATCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATATCAGGTTTCTGGTGAATATGCAATGATAAAAGCTGCTGGTGCACTAAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCACTGTTGTGTCTCCGAAGGGCTGGTGCTGATATCATCCTTACATATTTTGCTCTGCAAGCCGCCAGATGTTTGTGTGGAGAAAAGAAGTGA 1239 0.4859 MASTIPNAPSALNCQSYVGLRAPQRSLKFSFPRAATKSRRPCLFVVRASDSDFEAAVVAGNLPPAPPVPPKPAAPVGTPVVPSLPLQRRPRRNRRSPALRSAFQETSISPANFVYPLFVHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQAQAGADVVSPSDMMDGRVGAMRAALDAEGFQHVSLMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMDPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYAMIKAAGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARCLCGEKK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2982 412 Pfam Delta-aminolevulinic acid dehydratase 88 405 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 CDD ALAD_PBGS_aspartate_rich 96 408 - -
Ssu1g2982 412 SMART ALAD_2 85 407 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 11 412 - -
Ssu1g2982 412 SUPERFAMILY Aldolase 83 408 - -
Ssu1g2982 412 MobiDBLite consensus disorder prediction 68 101 - -
Ssu1g2982 412 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 326 338 IPR030656 -
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 205 219 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 326 342 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 351 366 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 236 255 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 381 400 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 PRINTS Delta-aminolevulinic acid dehydratase signature 274 293 IPR001731 GO:0004655|GO:0033014|GO:0046872
Ssu1g2982 412 Gene3D Aldolase class I 78 412 IPR013785 -
Ssu1g2982 412 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 11 412 IPR001731 GO:0004655|GO:0033014|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2982 K01698 - gmx:548095 684.871