Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2980 ATGGCTTCTGGTTCAGATTTTGCGTTAGCGCTTTCTTCTGAACTCGAGTCAGTTTTGAGGTTGAAGACTGTTAACTACTTTGTGACGAGGAGGCCATGGCTTGATCTTTATGGAGTTAACGTGAGACCTGTTGCGCCATTTGGGAGTGCAAGTAGAAGGCCTTATGTGGATCCCGCACTTTTACATCGTTCCTTACCTGATGAGCTGCTTTTTGAGgtCTTTGCCCGAATGACTCCATATGACTTGGGGAAAGCATCTTGTGTATGTCGAAAATGGAGATACACAATTCGTATCCCTGTATTTTGGCGCAATGCATGCTTGAAGGCTTGGCAGGTATCTGGAATTGTAGAAAACTATAAGATACTTCAATCAAAATATGATGGCTCATGGCGGAAAATGTGGCTGTTACGACCAAGGTTGCGGACTGATGGTCTTTATGTGAGTAGAAATACCTACATTCGAGTTGGAGTTGCAGAGTGGAAAATCACTAATCCAGTTCATGTGGTCTGCTATTTCCGGTACCTGAGATTTTTTCCTTCTGGACGATTCCTTTACAAGAATTCATCTCAGAAGATCAAGGATGTGGTGAAGTGCATGAACTTTCGATTGTCTAAAGCAGACTGTGTTTTTGGTGGCCACTACACATTGTCAGATGACAAGGTTGAAGCTGCAGTCTTGTATCCAGGCATGCGACCTACTGTTTTGAGGATACGCTTAAGGATAAGGGGAACAACAGCAGGGGCAAACAATCGGATGGATTTGATCTCACTTGTCACTAGTGGTGTAAACAGTAGTGAGGCAAGTGCACCTGAGGAGGACATTCTTGGAGTTGTTGAAGGATGGCAGGATGATGAAACACACAACCCAGATGTACCAGCCGTCTCACATAAGAGGGGCATGACTCCCTTTGTCTTTGTTCCATTTGAAGAGGTGGAGACATCTGTTTTGAACCTTCCGGTGGAGaaaatggattattttgtaCCTGGTTGA 990 0.4384 MASGSDFALALSSELESVLRLKTVNYFVTRRPWLDLYGVNVRPVAPFGSASRRPYVDPALLHRSLPDELLFEVFARMTPYDLGKASCVCRKWRYTIRIPVFWRNACLKAWQVSGIVENYKILQSKYDGSWRKMWLLRPRLRTDGLYVSRNTYIRVGVAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQKIKDVVKCMNFRLSKADCVFGGHYTLSDDKVEAAVLYPGMRPTVLRIRLRIRGTTAGANNRMDLISLVTSGVNSSEASAPEEDILGVVEGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSVLNLPVEKMDYFVPG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2980 329 Gene3D - 56 143 - -
Ssu1g2980 329 PANTHER F-BOX ONLY PROTEIN 48-RELATED 14 313 IPR045118 GO:0019005|GO:0031146
Ssu1g2980 329 SMART fbox_2 65 105 IPR001810 GO:0005515
Ssu1g2980 329 PANTHER F-BOX ONLY PROTEIN 9 14 313 - -
Ssu1g2980 329 ProSiteProfiles F-box domain profile. 59 105 IPR001810 GO:0005515
Ssu1g2980 329 Pfam F-box only protein C-terminal region 119 329 IPR045464 -
Ssu1g2980 329 Pfam F-box-like 63 108 IPR001810 GO:0005515
Ssu1g2980 329 SUPERFAMILY F-box domain 63 141 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2980 K10295 - gmx:100800263 648.277