Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g2976 | ATGGTCGACTACGTGTCGTCCCTGGGAACGCACGTGGGAGACGTTGGAGGGTTTCAGTTTCACGCTTTCCCTACTCTGGAACAGCTTTCATCGGTCTCGGAGCAACAGCTTAGAGACGCTGGTTTCGGTTACAGggctaaatatataattggcaCGGTTAATGCTTTGCGATCAAAACCTGGTGGAGGGGAAGAATGGCTTCGCTCTCTTCGTAAGTTGGGTCTTCAAGATGTTATATCTGCACTCTCTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGTGTTGCTCTCTTCTCGCTCGATCAACACCATGCCGTTCCTGTTGACACCCACGTATGGCGGATTGCCACAAAGTATCTCTTACCTGAGCTTGCAGGTTCGCAGCTGACACCGAAGCTCTGCGATCGTGTTGCAGAGGCATTTGTAACCAAATATGGTAAATATGCTGGCTGGGCGCAGACTCTATTATTCATAGCTGAATTGCCTTCACAAAAGGCCCTTCTACCTTCACATTTGTGGACTAACAAACAACACAATCTTGCAAAGATAGAAGATGGTGAAGAAGAAGTTGAGTGA | 579 | 0.4715 | MVDYVSSLGTHVGDVGGFQFHAFPTLEQLSSVSEQQLRDAGFGYRAKYIIGTVNALRSKPGGGEEWLRSLRKLGLQDVISALSTLPGVGPKVAACVALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCDRVAEAFVTKYGKYAGWAQTLLFIAELPSQKALLPSHLWTNKQHNLAKIEDGEEEVE | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g2976 | 192 | SUPERFAMILY | DNA-glycosylase | 8 | 160 | IPR011257 | GO:0003824|GO:0006281 | |
| Ssu1g2976 | 192 | SMART | endo3end | 8 | 162 | IPR003265 | GO:0006284 | |
| Ssu1g2976 | 192 | Gene3D | - | 100 | 163 | IPR023170 | - | |
| Ssu1g2976 | 192 | PANTHER | N-GLYCOSYLASE/DNA LYASE | 1 | 177 | - | - | |
| Ssu1g2976 | 192 | CDD | ENDO3c | 21 | 159 | IPR003265 | GO:0006284 | |
| Ssu1g2976 | 192 | Gene3D | Hypothetical protein; domain 2 | 1 | 99 | - | - | |
| Ssu1g2976 | 192 | PANTHER | 8-OXOGUANINE DNA GLYCOSYLASE | 1 | 177 | - | - | |
| Ssu1g2976 | 192 | Pfam | HhH-GPD superfamily base excision DNA repair protein | 19 | 120 | IPR003265 | GO:0006284 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g2976 | K03660 | - | gmx:100789749 | 354.369 |
Event-related genes