Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2956 ATGGCGGAGGAGAAGCGGGCGTCGTCGTCGTTCGTGAAGAAAGGCGACCGGCAAATGTTCACGGTGGAGCTCCGGCCAGGTGAGACCACCATAGTTTCGTGGAAGAAGCTGATGAAGGATGCTAACAAGCCCAACGGATCCACTTCGGCACCGCAACATGTCGCAATCGCTCCGGGTCAACCTGTTGAGGATGAAGAAAAAGATGCTTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGATGAGGATCTGCTTGAGGTTCCTGATGATGATCAGTATGATACCGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCTGTACTACCTAACCAGCAACCAAAGAAAAGGCGCAGAAAAGATGTATTGAAGAATGCTGGTGAAAACAATGATGATCATGGgtcaaataaaaatgtaaaagttgGCAGGCCAGCATCCAGCAAAACAGCTTCACTACAGGCAAAGAATATGTTAAATTCCTCTGAGCATTTGGTTGCACCTGGTGAACATTATGAAGACTTGAAACTTCGGAATCAATCAGATGTCTCtggaattattttgaaaaagaaaactgCTGATATTAAACCAATATTGGACCCTTCTGTCTCTTTGAAAACATCAAGTGATGATGTTCCTGCTCTGACAGATGCAAAGGATGCTGACAAGCAAAAGATAGGAGCTTTTCAATCTAAGAACATTAGTGATAAGTATAAAGATGCAAGTGGATCGTTTGATGCATCTCATCAGAAGTACAATGAAAAAAGTGCTTATGCACATTCCAAATCCCAACCTGGAAGACCCCCAAGTAATGTTGATGATTTGGAAAATATCAAtcggacaaaagaaaaaaatggtatGCGTGAACTGCCAGATCTTAACTTGTCTGTGGGAAAGTCTGCTACCCAAGCAACaAAATCTGAAAACATGCCCAAGAAAGATGGTTCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTCTCCGTGAGTTGGAAAAAATGGTTGCAGAATCTAGGCCACCAGCAGTGGATAACCAGGAGGCTGATACTGCATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAGCTAAAACTTGCTAAAGTTGCTAGACTAGCGGCAACCCATGGGAAAGTGTCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAGCTAAGAACATTAAAGagaaacttaaaaataatgatcAGTATGGGTCTGTCAGCAAAGCAGGAGGAGGATAATAGGTTTCAACAGATAAAGAAGGAAGTTGTTGATATGATTAAGATGCAGGCCCCAACTTTGGAATCCAAGCAGCAGCAGAAAAGTGGAGCATCTGGTGATTTTCAAGAATTTGGTCCTGATGGAAAAACAATAACTAAAAAGAAGTTTACCATGGATGCTGCATTGGAGGACAAGATTTGTGATCTCTATGATCTTTTTGTCGACGGCTTGGATGAAAATGCAGGTCCACAGATCAGAAAGTTGTATGCTGAGCTTGCACAGTTATGGCCCAGTGGTTACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTGTACAACAAACATAAGGATCaggaaaaaattaagagaaaaaagttgcTGGCACCTAAGCAAGAGGAGAATGTTCGATTTGATACCAGTTCAACTACTTCACAGCAGAACCTACGAGAGAGATCGACTCCAGAGTCTAGCAGTCATGCTTTTACTTCAGGGAACAAGCCAGTTTCTAATACAAGCACAACTGGCCGGGTCCCCAGTCCAGTGAATGgtctaaaacaagaaaaagcaaAGGGGAGTTCAAGCAGTTCCCTGGATGAAGTCAGGGTTGCAGATGGCGTTTTAACGAAGAAGGTAAAGAGAAAACCAGAACTTGAGTTGGAAGGAGCGCATTCAGGTCCTGAGAAGGTAGCTTCCTTGCAGGGAGAAGAAAGACCCAGGTCCCAAAAGCAGTCTACAATGCCACTTCCCACCAAATCAAATCAGCAGCCAACATCTCTCCCTGATCTTGAACAGTCAAGCTAA 2193 0.4109 MAEEKRASSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDANKPNGSTSAPQHVAIAPGQPVEDEEKDASQPNRFSAVIEKIERLYMGKDSSDDEDLLEVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPNQQPKKRRRKDVLKNAGENNDDHGSNKNVKVGRPASSKTASLQAKNMLNSSEHLVAPGEHYEDLKLRNQSDVSGIILKKKTADIKPILDPSVSLKTSSDDVPALTDAKDADKQKIGAFQSKNISDKYKDASGSFDASHQKYNEKSAYAHSKSQPGRPPSNVDDLENINRTKEKNGMRELPDLNLSVGKSATQATKSENMPKKDGSSVRPKTSMLEKALRELEKMVAESRPPAVDNQEADTASQAVKRRLPREIKLKLAKVARLAATHGKVSKELINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEEDNRFQQIKKEVVDMIKMQAPTLESKQQQKSGASGDFQEFGPDGKTITKKKFTMDAALEDKICDLYDLFVDGLDENAGPQIRKLYAELAQLWPSGYMDNHGIKRGICRAKERRRALYNKHKDQEKIKRKKLLAPKQEENVRFDTSSTTSQQNLRERSTPESSSHAFTSGNKPVSNTSTTGRVPSPVNGLKQEKAKGSSSSSLDEVRVADGVLTKKVKRKPELELEGAHSGPEKVASLQGEERPRSQKQSTMPLPTKSNQQPTSLPDLEQSS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2956 730 MobiDBLite consensus disorder prediction 140 205 - -
Ssu1g2956 730 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 730 - -
Ssu1g2956 730 Pfam HPC2 and ubinuclein domain 100 142 IPR014840 -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 576 730 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 482 501 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 667 687 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 295 361 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 336 351 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 181 201 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 95 109 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 40 72 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 700 730 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 576 596 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 90 109 - -
Ssu1g2956 730 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 730 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 598 663 - -
Ssu1g2956 730 MobiDBLite consensus disorder prediction 153 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2956 Ssu-Chr1 77746257 77754883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2956 - - gsj:114415452 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2956 1 77746257 77754883 Ssu1g2956 1 77746257 77754883 ECH