Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2950 ATGGCCACAAGTTGCTCCTACATGGTTTCCACCAAATTATCCATGTTTGGTTGGAgtggaggaagaagagaagtgAGAAACCGGAGAGCATTTTTCGTTTCAGCTCAACAACAGAGCGATGTCCAGGAAGCAGAGAGCGTGAAGGTAGAAGAGGAGCAAGAGCAAGAACAAGTACAAACCCAGAAACCGAAGCCAAAAGGAACAAAACCAAGGCCAGTGGAACCTCAGGTGAATGTGAAGAGCAAAAACATGATCAGGGAATATGGAGGGCAGTGGTTGAGCAGCACCACGCGCCATGTGAGGATCTATGCAGCGTATATCGACCCAGTAACTTATGCGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCTACTGATGAGTTTGTGTGGAATCCTGACACCTGCAACATGGTCTATTCTTACTTCCAGGAGCTTGTCGATCACTACGAGGGTGCTCCATTGACAGAATACACACTTCGCCTGATTGGTTCGGACATAGAGCACTATATAAGGAAGATGTTATATGATGGGGTAATCAAGTATAACATGAATGCAAAGGTTCTGAATTTCAGCATGGGCAAGCCACGGATCATGTTCAACAATGATATCCAACCTGATGGTGCAATTGAGAAATGA 648 0.4367 MATSCSYMVSTKLSMFGWSGGRREVRNRRAFFVSAQQQSDVQEAESVKVEEEQEQEQVQTQKPKPKGTKPRPVEPQVNVKSKNMIREYGGQWLSSTTRHVRIYAAYIDPVTYAFDQTQMDKLTLILDPTDEFVWNPDTCNMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGVIKYNMNAKVLNFSMGKPRIMFNNDIQPDGAIEK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2950 215 MobiDBLite consensus disorder prediction 44 59 - -
Ssu1g2950 215 MobiDBLite consensus disorder prediction 36 76 - -
Ssu1g2950 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 210 IPR018922 GO:0016655
Ssu1g2950 215 Pfam Cyanobacterial and plastid NDH-1 subunit M 93 201 IPR018922 GO:0016655
Ssu1g2950 215 Coils Coil 34 61 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2950 - - gmx:100527195 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2950 1 77592083 77593574 Ssu1g2950 1 77592083 77593574 ECH