Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2929 ATGGATGAAGTCACACGACAACATGAGATGGTTGGTGAGACTGAGgaggagaaaataaagaaaaatctgCATTCAGAGACAACACAAAGTACTGGAGAGAGTAACACACAAAGCCATGAAAATAGTACCGCTTCAAAAGAAGGTTTTATTACTGGTACGCCATCTGAAACTTTGATTGAAACTAGCGCTGAAAATGGAACATGGTCAACTCAAGCTGCAGAGTCACAGCATGAGAAGGAATCACAGAAGTCTTCAATTTCTATTGACAGCAGAAAATATGACTGGAAACTTTGCAATACAACTGCAGGATCAGAGTATATTCCTTGCCTTGACAATTGGCAAGCAATTAGAAAGCTTAAAAGCATAAGGCACTATGAACATCGCGAGAGGCACTGTCCTGATGAAGCTATCACTTGTCTTGTTTCTCTGCTTGAGGGCTATAGAATCCCAATCAAGTGGCCCAAAAGCAGGGAAATGATATGGTACAACAATGCTCCACATACAAAGCTTGTAGAAGTTAAGGGTCATCAAAACTGGGTCAAAGTTACTGGAGAATACCTTACTTTTCCTGGTGGTGGAACTCAGTTTAAACATGGCGCTCTTCATTACATTGAATTCATTCAGAAATCTCTTCCTAAAATTGCGTGGGGGAAGAGAAGTCGTGTGATATTGGACGTTGGGTGTGGGGTAGCCAGCTTTGGAGGCTATCTGTTTGAAAAAGACGTTCTGACCATGTCATTTGCTCCTAAAGATGTGCATGAGGCACAAGTGCAATTTGCTCTGGAACGGGGAATTCCTGCCACATTAGGTGTCATGGGCACCATAAGATTACCCTACCCTGGTTCTGTCTTTGATCTTGTCCACTGTGCTCGTTGTAGAGTCCCTTGGCACATAGAAGGTGGCAAGTTACTCTTAGAGCTTAACCGTGTCTTACGACCTGGAGGTCACTTTGTATGGTCTGCTACTCCAGTGTACCAAAAGGATCCAGAAGACGTTGAGATTTGGAAAGCCATGGGTGAAATTACAAAGTCAATGTGCTGGGATCTGGTGGTAATTGCGAAGGACAAATTGAATGGAGTGGCAGCAGCAATATATAGAAAACCAACCGACAATGAATGctataacaaaagaataaaaaatgagccACCAATGTGCCACGAATCTAATGATCCAAATACAGCCTGGAATATATCACTACAGGCTTGTATGCACAAAGTGCCTGTAGACACATCAGAGCGTGGATCAATCTGGCCTGAGCAATGGCCACTGAGGTTGGAGAAACCACCTTACTGGTTAGACTCTCAGGCTGGGGTTTATGGAAGAGCTGCTTCTGTGGAATTCACTGCTGATTACAGGCATTGGAAAAACGTTCTTTCCCACTCATACTTGAATGGAATGGGTATCAATTGGTCTTCAGTAAGAAATGTCATGGACATGAAAGCTGTTTATGGAGGGTTTGCTGCAGCGCTCAGAAGCCTGAAATTAAATGTTTGGGTAATGAATGTGGTTCCAGTTGATTCTCCAGACACACTGCCAATAATATATGAGCGAGGATTATTCGGTATTTATCATGATTGGTGTGAATCCTTCAGTACTTACCCTAGATCTTATGATCTTCTTCATGCAGACTCCATATTCTCAACACTTAAGGAAAAGTGCAACATAATGGCAGTGATTGCAGAAGTTGATAGGATCCTGAGACCAGAAGGATATTTGATCGTAAGAGACAATGTTGAAACTATTGGTGAGATAGAGAGCATGGCTAAATCACTACACTGGGATATTCGGTTGACATATTCCAAAAATGGGGAGGGATTACTTTGCATTCAGAAGACATTCTGGCGTCCAACAAAGGTTGAAACCGTTGCTTCAGCCATTGCCTGA 1884 0.4172 MDEVTRQHEMVGETEEEKIKKNLHSETTQSTGESNTQSHENSTASKEGFITGTPSETLIETSAENGTWSTQAAESQHEKESQKSSISIDSRKYDWKLCNTTAGSEYIPCLDNWQAIRKLKSIRHYEHRERHCPDEAITCLVSLLEGYRIPIKWPKSREMIWYNNAPHTKLVEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIEFIQKSLPKIAWGKRSRVILDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPATLGVMGTIRLPYPGSVFDLVHCARCRVPWHIEGGKLLLELNRVLRPGGHFVWSATPVYQKDPEDVEIWKAMGEITKSMCWDLVVIAKDKLNGVAAAIYRKPTDNECYNKRIKNEPPMCHESNDPNTAWNISLQACMHKVPVDTSERGSIWPEQWPLRLEKPPYWLDSQAGVYGRAASVEFTADYRHWKNVLSHSYLNGMGINWSSVRNVMDMKAVYGGFAAALRSLKLNVWVMNVVPVDSPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADSIFSTLKEKCNIMAVIAEVDRILRPEGYLIVRDNVETIGEIESMAKSLHWDIRLTYSKNGEGLLCIQKTFWRPTKVETVASAIA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2929 627 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g2929 627 MobiDBLite consensus disorder prediction 25 75 - -
Ssu1g2929 627 MobiDBLite consensus disorder prediction 1 85 - -
Ssu1g2929 627 PANTHER METHYLTRANSFERASE PMT25-RELATED 9 624 - -
Ssu1g2929 627 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 105 604 IPR004159 GO:0008168
Ssu1g2929 627 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 385 IPR029063 -
Ssu1g2929 627 CDD AdoMet_MTases 223 318 - -
Ssu1g2929 627 Gene3D Vaccinia Virus protein VP39 194 353 IPR029063 -
Ssu1g2929 627 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 624 IPR004159 GO:0008168
Ssu1g2929 627 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 593 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2929 Ssu-Chr1 76848103 76852712 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2929 - - gmx:100793395 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2929 1 76848103 76852712 Ssu1g2929 1 76848103 76852712 ECH