Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2927 ATGGCATGTCATTGTGCTTACAATGCCTTTTCATTTTCACCAACCAGAGAATTCTTCACCACCAACCACATCATGTCAAAACCATCCACTAGATGCAGACCCTTTCTCTTGTCCGTGACCAATGCCACACCATCCTACAACACCCTTGTTTCTGagGCTGTTAGGCTCTTGGTTCCTCCGGCAAGATTTGAAGCTTCAAAACTTAAGGTTATTCGATTGGAAGATCAGATAAATAAACATGCAAGTTTTATTCCGAGAACCTACATTCTATCCCATTGTGACTTTACAGCTAAGCTGACTTTAGCTGTGTCCAATGTGATCAACCTAGAGCAGTTGAGAGGGTGGTACGAGAAGGATGATGTTGTAGCTGAATGGAAGAAAGTGCAAAATGAAATGTGCCTACATGTTCATTGCTTTGTCAGTGGTCCCAATTCCTTTATGGATCTGGCTGCTGAATTGAGATATCACATATTCTCCAAGGAAATGCCTTTGGTACTCAAAGCAATTCACTGTGGAGATTCTGCACTTTTCCGTGAGCATCCCGAATTGCTGGATTCTGTAGTTAGaatatattttcattctagCTCACAAAAATACAACAGGATGGAATGTTGGGGACCTCTCAACGATGCGATGGAgGGAAAACAAGCGGATCAGTTCCAAACGTCAATAAGCAGAGATTGTCCTGAAAAGTGGCGAAGCCCAAAGTCCATCTTCCAAGCTctttttgcttttcttctttcaacTATATAA 753 0.4024 MACHCAYNAFSFSPTREFFTTNHIMSKPSTRCRPFLLSVTNATPSYNTLVSEAVRLLVPPARFEASKLKVIRLEDQINKHASFIPRTYILSHCDFTAKLTLAVSNVINLEQLRGWYEKDDVVAEWKKVQNEMCLHVHCFVSGPNSFMDLAAELRYHIFSKEMPLVLKAIHCGDSALFREHPELLDSVVRIYFHSSSQKYNRMECWGPLNDAMEGKQADQFQTSISRDCPEKWRSPKSIFQALFAFLLSTI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2927 250 PANTHER PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC 1 247 - -
Ssu1g2927 250 Pfam Staygreen protein 62 211 IPR024438 -
Ssu1g2927 250 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2927 Ssu-Chr1 76837410 76840908 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2927 K22013 - gmx:100795181 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2927 1 76837410 76840908 Ssu1g2927 1 76837410 76840908 ECH