Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2916 ATGGATGTATTTCATGTCACGGATCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATTGACTTCATTGAAAAGGCTCTAGGACCAAAGAGCCAGAGCACAGAAGGGGTGACAAACTGGTCAAGCAAACTGGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTACTTGGCAGAGACCGCCCGGGTCTCTTGTCTGAGATTTCAGCTGTCCTTGCCAACCTCCATTTTAATGTTGTTGCAGCAGAAGTTTGGACTCATAACAGGCGAATCGCTTGCGTCCTTTATGTCAGTGACGCTACAAACCAAGCTGTGAATGATCCAAACAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGATGGGGAGAAAGTAGCTAGGACCAGTTTCTCCATGGGTTTCACCCATATGGATCGGCGGCTTCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTCTGGAGTGGCAACAGACATTGATTGTCCTCCCTCTTTCAGGCCAAAAATCACAATAGAACGTTGTGAGGAAAAAGGGTACTCAGTGGTCAGTGTCAGGTGCAAAGATCGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAATCTCATCAGAAGGCCCTTATGCATCCCAGGAATACTTTATTCGGCACATGGATGGATGCACGCTTGATActgaaggagaaaaagaaagggttATCAAATGCATTGAAGCTGCTATTAGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGGGTGGGCTTGCTGTCTGAAGCAACAAGGATTCTACGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTATCAACAAGAGGGGAGCAAGCGCTGAATGTGTTCTACGTGAGGGATGCATCAGGGAACCCAGTGGACATGAAAACTATCGACGTACTTCgtaaagaaataggtaagacaATGATGGTGGATGTGAAGAGAGTACCAAGCAATGCCAAAGCACCAGAGACCCGGGGATGGGCCAAAACTAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTTACCTGA 1113 0.4412 MDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVTNWSSKLVGVHSVGDHTAIELLGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVLYVSDATNQAVNDPNRLSLMEEQLNNILRGCDGEKVARTSFSMGFTHMDRRLHQMLFADRDYESSGVATDIDCPPSFRPKITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSEATRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPVDMKTIDVLRKEIGKTMMVDVKRVPSNAKAPETRGWAKTSFFFGNLLERFFT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2916 370 Gene3D - 53 134 - -
Ssu1g2916 370 SUPERFAMILY ACT-like 50 127 IPR045865 -
Ssu1g2916 370 ProSiteProfiles ACT domain profile. 55 134 IPR002912 -
Ssu1g2916 370 Pfam ACT domain 55 124 IPR002912 -
Ssu1g2916 370 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 370 IPR040217 -
Ssu1g2916 370 ProSiteProfiles ACT domain profile. 267 344 IPR002912 -
Ssu1g2916 370 SUPERFAMILY ACT-like 263 333 IPR045865 -
Ssu1g2916 370 CDD ACT_ACR_3 187 261 - -
Ssu1g2916 370 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 1 370 - -
Ssu1g2916 370 CDD ACT_ACR_4 265 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2916 Ssu-Chr1 76682898 76686400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2916 - - gmx:100789173 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2916 1 76682898 76686400 Ssu1g2916 1 76682898 76686400 ECH