Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2913 ATGGAGGTTGAAGTGCCTGTTGTGATTGTGGGTGCAGGGCCTGCTGGCTTAGCAACCGCTGCATGCCTTAACAAACTTTCCATCCCCAACGTTGTCCTTGAAAGAGATGATTGTCATGCATCTCTTTGGAGGAAAAGGACCTATGACCGCTTGAAACTTCACTTAGGCAAAGAATTTTGTAACCTCCCTCACATGCCCTTTCCATCTTGTTTTCCCACCTTTGTCCCCAGGATTGATTTTTTGCGCTACATTGATAACTATGTGACCCGTTTTAAGATTTCCATCCGGTATAACCGGAATGTGGAATCTGCCTCCCTTAGTGACAACGTTGGGAAATGGAGGGCCGTTGTTAAGGACACAGCATCAAATGCTGATGAGGTTTACGTGGCAGAGTATCTGGTCGTTGCAACCGGGGAGAATAGCGAAGGCTATGTACCCAAGATTGATGGGCTCGAAGGGTTTGAAGGAGAGTACATGCATTGCAGCAAGTACATGAATGGAAGAGATGTGTATGCCAAAAATGTCCTTGTTGTTGGCTGTGGAAATTCTGGCATGGAGATCGCTTATGATCTCTCAAATTGGGGTGCAAATACCTCTATTGTTGTTAGAGGTCCTgttcatttttttactaaagaaaTGGTGTACGTGGGAATGTCCTTGCTGAAATACTTGAAAATGGAGAAGGTGGACAAGCTTATGCTGCTTATGAGCAAGCTGAAGTACGGAGACATGTCCGAGTATGGCTTAACCAGGCCAAAGAATGGACCCTTCGTTCTGAAAGAAAAGGGTGGTACTACCCCTACCATTGATGTGGGCTGCGTTGGTAGGATTAAGAAAGGCGAAATAAAGgTTTTCCCAGCTATTTCAAACATCAAAGAAGGCAAGACAGTTGAGTTTGAGGATGGAGAAAATGGTCAATTTGATATCATCATCTTTGCTACTGGATACAATAGCACAGTGCTGAAGTGGCTCAAGGATTACAGAGATCTGTTCAATGAGAATGGAATGCCTAAACAAGGTCATCCAAATCACTGGAAGGGAGAAAATGGTCTCTACTGCGCTGGATTTTCAAGAAGGGGAATAGAGGGCATTTCTTTTGATGCCCAGCGTATAGCTGATGACATCAGTCTGAATGTGAATGCAAGGAAGATACCCGGTGCTGAGGCCAACTTTGCTTGCCTCAAACTCTTATAA 1194 0.4405 MEVEVPVVIVGAGPAGLATAACLNKLSIPNVVLERDDCHASLWRKRTYDRLKLHLGKEFCNLPHMPFPSCFPTFVPRIDFLRYIDNYVTRFKISIRYNRNVESASLSDNVGKWRAVVKDTASNADEVYVAEYLVVATGENSEGYVPKIDGLEGFEGEYMHCSKYMNGRDVYAKNVLVVGCGNSGMEIAYDLSNWGANTSIVVRGPVHFFTKEMVYVGMSLLKYLKMEKVDKLMLLMSKLKYGDMSEYGLTRPKNGPFVLKEKGGTTPTIDVGCVGRIKKGEIKVFPAISNIKEGKTVEFEDGENGQFDIIIFATGYNSTVLKWLKDYRDLFNENGMPKQGHPNHWKGENGLYCAGFSRRGIEGISFDAQRIADDISLNVNARKIPGAEANFACLKLL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2913 397 Gene3D - 3 384 IPR036188 -
Ssu1g2913 397 SUPERFAMILY FAD/NAD(P)-binding domain 7 277 IPR036188 -
Ssu1g2913 397 SUPERFAMILY FAD/NAD(P)-binding domain 292 381 IPR036188 -
Ssu1g2913 397 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 207 - -
Ssu1g2913 397 PRINTS Pyridine nucleotide disulphide reductase class-I signature 174 199 - -
Ssu1g2913 397 PRINTS Pyridine nucleotide disulphide reductase class-I signature 133 142 - -
Ssu1g2913 397 PRINTS Pyridine nucleotide disulphide reductase class-I signature 6 28 - -
Ssu1g2913 397 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 4 383 - -
Ssu1g2913 397 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 383 - -
Ssu1g2913 397 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Ssu1g2913 397 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2913 Ssu-Chr1 76512623 76514464 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2913 K11816 - gmx:100801203 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2913 1 76512623 76514464 Ssu1g2913 1 76512623 76514464 ECH