Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2888 ATGGATTTGATTAAGGCTTGGAGGTTGAGCCCTTGCGTAATTCCCTCAGCACCACTTATCACCATCCCTGGCAATGAGATTAGCTTCTTTGCCCCTCCTCCCAGTACAAGAAAATTCTCTTTTCAGTTTTGTACCTATCCCAACACTCGTAGAAACCCGCTAATTCCAATTCCACGTGGCAAAAGGAGAGACTCTGATTCGGAGCCGGTTCTAGAACCCACCATTGTCCAAGAAGTATCGTTCGACGACAACGacgacgaagaagaagaagacttCCTCGACGAATTTGAATACGAGGCAGCAGCGGATGTTGACGAAGACGACGGTGATGAGTACTAtgaggaagaagaggaataCGAAGAGGAGGCTGGTGTGCCTTATGCAGGTGATGGCGGCGCAGGTGGTGGAATCTCCCTCGCCGGAACGTGGTGGGATAAAAAAGCATTAGCCATTGCCAAAGAGGTTACTCTCTCTTTCGATGGCGACTTGCAAATATATGCTTTTAAAACATTGGTCAATTCCACCATTCAAGTGCGCATTGAGAAGCTTTCCAACAAGTCTGGTTCCCCCAGCATGGAAGATATTGAAGCCTTCTCTGCAACGTATAGAGCAAAATTGGATGAAGCAGAACTTGCCAAATTTGTCCCTGACAATATATGTTTGGAGGTGTCTTCTCCTGGTGTTGAAAGAATAGTTCGGATTCCAGATGACCTAGATCGATTCAAGGACCGACCTATGTACGTGAAATATGCCATTAATGATGATTCAAATAATCCAGCTGCAGAAGGTAATGGTGTTTTCAAGCTTGAATCCCTTGACATGGAAACAAAATGTTGCACCTGGGGTTTAGCTGATGTGAAAGTCAACAGACAGAAAGCAGGGAAAGGAAGACCACTGAATAAAAAGCAAAGAGAATGGCGTTTAAGCACTCCCTTTGATTCCTTACGTTTTGTACGGTTGCACtctgatatttaa 975 0.4297 MDLIKAWRLSPCVIPSAPLITIPGNEISFFAPPPSTRKFSFQFCTYPNTRRNPLIPIPRGKRRDSDSEPVLEPTIVQEVSFDDNDDEEEEDFLDEFEYEAAADVDEDDGDEYYEEEEEYEEEAGVPYAGDGGAGGGISLAGTWWDKKALAIAKEVTLSFDGDLQIYAFKTLVNSTIQVRIEKLSNKSGSPSMEDIEAFSATYRAKLDEAELAKFVPDNICLEVSSPGVERIVRIPDDLDRFKDRPMYVKYAINDDSNNPAAEGNGVFKLESLDMETKCCTWGLADVKVNRQKAGKGRPLNKKQREWRLSTPFDSLRFVRLHSDI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2888 324 PANTHER OSJNBA0006B20.18 PROTEIN 1 324 - -
Ssu1g2888 324 SUPERFAMILY YhbC-like, N-terminal domain 173 229 IPR035956 -
Ssu1g2888 324 Pfam RimP N-terminal domain 170 229 IPR028989 -
Ssu1g2888 324 PANTHER OSJNBA0006B20.18 PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2888 Ssu-Chr1 76100281 76102692 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2888 - - gmx:100783320 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2888 1 76100281 76102692 Ssu1g2888 1 76100281 76102692 ECH