Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2886 ATGTTGAATTTGAAGAATTGCTTTTGTACCAGAAGGGTGGCTTTCTTGTGTATACTATATCTTACGGATACTGGTTGCTATACAGAAACGACAGAAGGAGGGAAAGTTATACGAAATAGAAGGTTTTGTGGAGTGGAGACCCTTCACATTGTCTGGAATATATTAAAGTGTAGATTCATAGAATTGATCAAATCTAGGGAAGACCATTTGTTACAACAAATTCTAAGGTTTTGGTGTATGGGTTTGATGGATATTCTATGttcttctatatttctttttacacTTGTTGAGTCCACTAGCAGATCAGGGACTATGTGGCCCCTAAACGCAGGTGTGGAGTCTACTGGAACTATCAGCTGGACAGTCTTCAGTTCAAGTATATTTGTGCTTGTAGCTCTTGTTCTCTCCACGTATCTAATATTTGAGCATTTAGCGGCCTATAATCAGCCTGAGGTTTTTTCCTTATGCTCCTTTACTTTTGGATCTGATCATTACTATTTATGTAATGCCTTGCTTCCCTTTTCTTACTGCTTCTTATAA 540 0.3667 MLNLKNCFCTRRVAFLCILYLTDTGCYTETTEGGKVIRNRRFCGVETLHIVWNILKCRFIELIKSREDHLLQQILRFWCMGLMDILCSSIFLFTLVESTSRSGTMWPLNAGVESTGTISWTVFSSSIFVLVALVLSTYLIFEHLAAYNQPEVFSLCSFTFGSDHYYLCNALLPFSYCFL 179
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2886 179 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 85 152 IPR005178 -
Ssu1g2886 179 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 85 152 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu1g2886 Ssu-Chr1 76082673 76083212 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2886 - - ccaj:109791436 128.642