Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2874 atgccTGTATTCAGAGAAGTGGAAGAGGGAGAGGGTGGGAAGATAATAAGGAAAATGAAGAGGAGCAGAGATATGGAGAAGAGCTCAGAGATAAATTCTGCCATTGAAGAGCTGTCCATGCTGGTTATAGTCAAACCTGGAGGAAAACATGAGACTGCACACATCCCCACCAGGCCTTTTCTATCTCTATGTTACTTGGTTCTGCAAGTTCTTGATAAGATAGGCCCTACGATGGCTGTTTTGAGACATGACGTTCACCAGAATATTAagAGGTTGGAAGTGATGTACGAATTGAATCCCTCAATGAATTCAAATTTGGTTGAAATATTGAAATCAGAAGCTAGCAAAGGCAACGCAAGGAAGAGGTCTAGTAGTAGTAAGGCCTTTCTTTGGCTCACAAGGTCCCTGGATTTCTCCTCAGCACTGTTACATAGACTAGAAAACGATCCTAAAAAGAATATGGAGGAAATAGTTCAAGAGTCATACGATGCAACCTTGTCACCATGGCATGGATGGATTTCATCAGCTGCTTTCAGAGTGGCTATAAAACTAGTGCCAGATAGTAAAACTTTCATGGATCTCCTCAAGGAAAAAGATGAAAACTGTGACACCCTAAAGGAGAAAATACAAATCTTGGTTTCTTTGCTTGTGCCTTTTCTTGAGGATATTCATTGTATTCTTGTAAGCTTAACATCGTGCTTCCTAACATAA 711 0.4008 MPVFREVEEGEGGKIIRKMKRSRDMEKSSEINSAIEELSMLVIVKPGGKHETAHIPTRPFLSLCYLVLQVLDKIGPTMAVLRHDVHQNIKRLEVMYELNPSMNSNLVEILKSEASKGNARKRSSSSKAFLWLTRSLDFSSALLHRLENDPKKNMEEIVQESYDATLSPWHGWISSAAFRVAIKLVPDSKTFMDLLKEKDENCDTLKEKIQILVSLLVPFLEDIHCILVSLTSCFLT 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2874 236 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 21 228 - -
Ssu1g2874 236 Gene3D Glycolipid transfer protein 18 231 IPR036497 -
Ssu1g2874 236 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 21 228 - -
Ssu1g2874 236 Pfam Glycolipid transfer protein (GLTP) 55 196 IPR014830 GO:0005737|GO:0120009|GO:0120013
Ssu1g2874 236 SUPERFAMILY Glycolipid transfer protein, GLTP 50 228 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2874 Ssu-Chr1 75931421 75932896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2874 - - gmx:100527808 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2874 1 75931421 75932896 Ssu1g2874 1 75931421 75932896 ECH