Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2871 ATGGCATCGCTACCCCAAATGTGTGCCCCATTAGGAGCTTGCATGAGCTGCAACAAGATTATCGACACTCGACCATGCATTGCCCAATTATGCAACTACAAGAAGAGTACTCATTTCAGCAAGCTAGTTGCCAATCACCAAATTGCCAAAGGTACGTTGTTTCCATTAGCATTAGTAGGACAGAAGAAGCAATGccaaaatgaaaaatggaaaGCACGGGCCGGGGAAACTCCTGAGTCCCTGCAACATTCACTTATAGAGACCGCTGTCGAAGATTTCTACCGCGCcttcaatgataaaaaaattgatcaattgAAGCAATTAGTTTCGGATGACTGTGAGTACCAGGACCTCCTCTTCTACAGTCCCCGCAAAGGCCAGGACGTCCTGAAGTTTTGGCAGCACGTGATGGATGCGATGGGTCCACATGTTGAAATTGTAGTGGAAAGTATTGAAGTGGACAATCTTGTGGCTAATGTGTCTTGGCACTTAAAGTGGGACGAAAGGAAAATACCCTTCACATATGGATACAGAATCTTTAAGTTTAAAGAACATGAAGGAAGATTTCTTATCGGAAAGATATACGGCTTGGAGGAACTTCCACTAAAACCTGATGAACTAGTACTGAACGTGTTAAAAGCAATTCGTACGTTTTTGGACAGCTATCCAACAATGGGTAGAGGGTTGCTTGACGCTCTTGCCTCTCAAGATGGTAGAATACATGGGGGAAGTCCATGA 738 0.4228 MASLPQMCAPLGACMSCNKIIDTRPCIAQLCNYKKSTHFSKLVANHQIAKGTLFPLALVGQKKQCQNEKWKARAGETPESLQHSLIETAVEDFYRAFNDKKIDQLKQLVSDDCEYQDLLFYSPRKGQDVLKFWQHVMDAMGPHVEIVVESIEVDNLVANVSWHLKWDERKIPFTYGYRIFKFKEHEGRFLIGKIYGLEELPLKPDELVLNVLKAIRTFLDSYPTMGRGLLDALASQDGRIHGGSP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2871 245 Gene3D - 78 191 - -
Ssu1g2871 245 PANTHER NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEIN 6 234 - -
Ssu1g2871 245 PANTHER NTF2-LIKE DOMAIN-CONTAINING PROTEIN-RELATED 6 234 - -
Ssu1g2871 245 Pfam SnoaL-like domain 90 182 IPR037401 -
Ssu1g2871 245 SUPERFAMILY NTF2-like 86 176 IPR032710 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2871 - - gmx:102667509 291.582