Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2867 ATGCTTGTCCAGTCCTCAACATTACCACTCCCACCCTTCACCTCTCTTGACCGCAACAACATGGAATTCCCACACATTCCCACAGAAAGATCGCCGAGAAGAGAGCTCCAACTCCAAGGTCCACGTCCCACGCCGCTTAGAATAAACAAAGACTCTCACAAGATCAAGAAACCACCGCTGGCACCGCAACCTCCACCGCGCCAACCCATAATAATCTACACCGTTTCCCCTAAGGTTATCCACACCACGCCCGGCGACTTCATGAACCTCGTTCAACGCCTCACCGGGTCCTCTTCCTCGTCGTCCAACTCTTCTTCGTCAGAAGTGCTGTCCAACAACGACCCTTTCAACAACGACGGCGGGGTGGTGTCGCCGGCGGCGCGTTACGCCGTCATAGAGAAGGCCAAGGCTATGTCCCCCATGGGAAAGAAACAGGTGATCATGGGTCATGGGGATAATAACATAATAGGCGATGTGGAAGGGATAGAGATTATGGGTCATGGGGTACTTGAGAGATCACAAAATATGTTTCAAGGGATTTTGTCTCCTGGACCGGCTTCACTTTCTCCCATTCCTTCCAGTTTTTTCTCTCCACCGTCTTCGGATCCGACCATGGTTAGCTTCCTTCATGATTTGAGTCCTATGCTTCATAGTGGCAGAAATTTTACGGAGGGTGCTTTCCTCTTGCCTAGCCCTTCTTCAAACTTTAGCTTTGTTTCACCGCATACTCCGTCTATAGACTTATTCAACTATTTCCTAGATTAG 765 0.4993 MLVQSSTLPLPPFTSLDRNNMEFPHIPTERSPRRELQLQGPRPTPLRINKDSHKIKKPPLAPQPPPRQPIIIYTVSPKVIHTTPGDFMNLVQRLTGSSSSSSNSSSSEVLSNNDPFNNDGGVVSPAARYAVIEKAKAMSPMGKKQVIMGHGDNNIIGDVEGIEIMGHGVLERSQNMFQGILSPGPASLSPIPSSFFSPPSSDPTMVSFLHDLSPMLHSGRNFTEGAFLLPSPSSNFSFVSPHTPSIDLFNYFLD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2867 254 Pfam VQ motif 74 100 IPR008889 -
Ssu1g2867 254 PANTHER F16F4.1 PROTEIN-RELATED 21 252 IPR039607 -
Ssu1g2867 254 MobiDBLite consensus disorder prediction 94 119 - -
Ssu1g2867 254 PANTHER F16F4.1 PROTEIN 21 252 - -
Ssu1g2867 254 MobiDBLite consensus disorder prediction 94 122 - -
Ssu1g2867 254 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2867 Ssu-Chr1 75823608 75824372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2867 K20725 - gmx:100813603 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2867 1 75823608 75824372 Ssu1g2867 1 75823608 75824372 ECH