Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2858 ATGGAGATAGgtatagagaaaatgaaagaagatgTAGACGTGCCAAACCTCAATGTTGTTAGCAATAGCATGTCAGAAAGTTGTAGTTGTAATGAATTGGAAGAGAGAAGCAAGAAAGCTGAAATGAGGTGTGCTGAGTTAGAATTCAagcttcaaaagaaaaatgagcaATGTGAAGCACTTGAGGCTAAACTCAAGGCACTTGAAGGTGAGCTGGAGGTTTTGAGGGTGTCCAGTGAAGGACCtaaggagaaaaaagaagttgGTAATGTAAGAGAGAGTGAGGTAGAAACAATTATTGATTTGACAGATGACAATGAGGTTTTACAACTAATGATTGAAAACAGTGTTTTGGAATGTGAGAAGAAAAGGGCTGAGAGTGAGGTTGAGGTCTGGAAAGGCAAGTACTGGAAACTGGAATCATGGGCCTCACAGTTGAAGCTGGAAAGTGGCCGTTATTACCATGAAGAAAATGGAAAGGAGAAGGAAAGTAACCGGATTAGGACTGATGGTAGTTCGCATGTGGAACCAATTATAGATTCTAAAGTGCACCAAGTTGGGAGAGTTAGAAGGCAATTGACATTTGAAATTGGAGAGAGTCCCAGCAAAAAGATGGCTCCATCTACACCCTTTGTTGCAAAATCTGCTTCTGTTGTTGTAATTGATATCGTTGACAGTGATGATGAACCTAATATTGCCCACCCTGTGCTAGATAGTCAGGGTAGCAGAATTATTTCTGTTTCATCATGTTTTGCTGCAGAAAATGAGAAGATGTCTAAAGGTTATGCCCAAAACAACGAGGAAGATTTGAATTCTGGTGAAGATCTCCCTTTTGTGGTAACACctaagaggaaaagaaattgtAATGTTGTCACAAGTGAGTCAGAacgtgatgatgatgatatgcCGATTTGTAAATTTAAGAGGATGCATATTCAGGAAGTAAGTCCTGATCAAGTCAGATGTGACACAAACAACTTGGTGACTGCTTCTACTTCTGCAGACTACAAGGTTACCAGCATTGTAACACCTAGGCAGCGTCTAATACCACTGAGAAAATCGGCCAAAAAAAGTCAAGACGGTAAAACAGCTTATAGATCTAGTAAGGCCAAACATCAGCAAAGTATCCCGACAAATGATGAGGATGAGGACAAGGATGATGATGAATCAGAGGAGGATTTGTCAGACTGTGAAGACGAAGGCTTGAGTGATtttattgttgatgattttgatGTTTCGCCCTGTGATGATACATCTAGCAAGTTACAAGATGCATCTAGTGGTGATGTGGACTCTGATTCCAGTAACGCACAACATGTACCAGATAATGACATGGACTCTGATTCACAAGATGTATCTGATGAGGACAAGGACTTCAGTAAGATATTATCACAAATTCATAGGAGGAAAGACCACATGGAGTGGGAATTTGAGGCCGACATGCTTGCAGCGTTTGGGAAGGATTCTGAATTGTGTATGAAGGCTGTGTGTGCTCTCTATCAACAGCAAACTTCTGAGGAACAGATGAGCAGGGGAGCATTGTATAGCAACCAGCGAGGATTCAGCAAGTTGGATGCTCACAGAGGCAGCACTTTGGCCGAGTTCCTCACTCATGGAGATCCTCGTGGTGGTTTAAAGAAGTCTGTGAAGGAATTGCAAGAACATGACCCCAAAGCAGTTGAACTGTGTAGAACCCTCGCCATTCGCTACTCAAAGCAACTATACCAGATCTACAAAAACAAAGAGGATCCTTTCTTTCCTTAA 1764 0.3923 MEIGIEKMKEDVDVPNLNVVSNSMSESCSCNELEERSKKAEMRCAELEFKLQKKNEQCEALEAKLKALEGELEVLRVSSEGPKEKKEVGNVRESEVETIIDLTDDNEVLQLMIENSVLECEKKRAESEVEVWKGKYWKLESWASQLKLESGRYYHEENGKEKESNRIRTDGSSHVEPIIDSKVHQVGRVRRQLTFEIGESPSKKMAPSTPFVAKSASVVVIDIVDSDDEPNIAHPVLDSQGSRIISVSSCFAAENEKMSKGYAQNNEEDLNSGEDLPFVVTPKRKRNCNVVTSESERDDDDMPICKFKRMHIQEVSPDQVRCDTNNLVTASTSADYKVTSIVTPRQRLIPLRKSAKKSQDGKTAYRSSKAKHQQSIPTNDEDEDKDDDESEEDLSDCEDEGLSDFIVDDFDVSPCDDTSSKLQDASSGDVDSDSSNAQHVPDNDMDSDSQDVSDEDKDFSKILSQIHRRKDHMEWEFEADMLAAFGKDSELCMKAVCALYQQQTSEEQMSRGALYSNQRGFSKLDAHRGSTLAEFLTHGDPRGGLKKSVKELQEHDPKAVELCRTLAIRYSKQLYQIYKNKEDPFFP 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2858 587 PANTHER BNAA03G12380D PROTEIN 8 587 - -
Ssu1g2858 587 MobiDBLite consensus disorder prediction 349 397 - -
Ssu1g2858 587 MobiDBLite consensus disorder prediction 415 456 - -
Ssu1g2858 587 MobiDBLite consensus disorder prediction 380 397 - -
Ssu1g2858 587 MobiDBLite consensus disorder prediction 416 443 - -
Ssu1g2858 587 Coils Coil 30 78 - -
Ssu1g2858 587 PANTHER BNAA03G12380D PROTEIN 8 587 - -
Ssu1g2858 587 MobiDBLite consensus disorder prediction 353 367 - -
Ssu1g2858 587 Coils Coil 108 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2858 Ssu-Chr1 75677317 75681205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2858 - - vra:106778871 788.875